Cargando…

Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features

For intravascular OCT (IVOCT) images, we developed an automated atherosclerotic plaque characterization method that used a hybrid learning approach, which combined deep-learning convolutional and hand-crafted, lumen morphological features. Processing was done on innate A-line units with labels fibro...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Juhwan, Prabhu, David, Kolluru, Chaitanya, Gharaibeh, Yazan, Zimin, Vladislav N., Dallan, Luis A. P., Bezerra, Hiram G., Wilson, David L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018759/
https://www.ncbi.nlm.nih.gov/pubmed/32054895
http://dx.doi.org/10.1038/s41598-020-59315-6
_version_ 1783497387352784896
author Lee, Juhwan
Prabhu, David
Kolluru, Chaitanya
Gharaibeh, Yazan
Zimin, Vladislav N.
Dallan, Luis A. P.
Bezerra, Hiram G.
Wilson, David L.
author_facet Lee, Juhwan
Prabhu, David
Kolluru, Chaitanya
Gharaibeh, Yazan
Zimin, Vladislav N.
Dallan, Luis A. P.
Bezerra, Hiram G.
Wilson, David L.
author_sort Lee, Juhwan
collection PubMed
description For intravascular OCT (IVOCT) images, we developed an automated atherosclerotic plaque characterization method that used a hybrid learning approach, which combined deep-learning convolutional and hand-crafted, lumen morphological features. Processing was done on innate A-line units with labels fibrolipidic (fibrous tissue followed by lipidous tissue), fibrocalcific (fibrous tissue followed by calcification), or other. We trained/tested on an expansive data set (6,556 images), and performed an active learning, relabeling step to improve noisy ground truth labels. Conditional random field was an important post-processing step to reduce classification errors. Sensitivities/specificities were 84.8%/97.8% and 91.4%/95.7% for fibrolipidic and fibrocalcific plaques, respectively. Over lesions, en face classification maps showed automated results that agreed favorably to manually labeled counterparts. Adding lumen morphological features gave statistically significant improvement (p < 0.05), as compared to classification with convolutional features alone. Automated assessments of clinically relevant plaque attributes (arc angle and length), compared favorably to those from manual labels. Our hybrid approach gave statistically improved results as compared to previous A-line classification methods using deep learning or hand-crafted features alone. This plaque characterization approach is fully automated, robust, and promising for live-time treatment planning and research applications.
format Online
Article
Text
id pubmed-7018759
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-70187592020-02-21 Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features Lee, Juhwan Prabhu, David Kolluru, Chaitanya Gharaibeh, Yazan Zimin, Vladislav N. Dallan, Luis A. P. Bezerra, Hiram G. Wilson, David L. Sci Rep Article For intravascular OCT (IVOCT) images, we developed an automated atherosclerotic plaque characterization method that used a hybrid learning approach, which combined deep-learning convolutional and hand-crafted, lumen morphological features. Processing was done on innate A-line units with labels fibrolipidic (fibrous tissue followed by lipidous tissue), fibrocalcific (fibrous tissue followed by calcification), or other. We trained/tested on an expansive data set (6,556 images), and performed an active learning, relabeling step to improve noisy ground truth labels. Conditional random field was an important post-processing step to reduce classification errors. Sensitivities/specificities were 84.8%/97.8% and 91.4%/95.7% for fibrolipidic and fibrocalcific plaques, respectively. Over lesions, en face classification maps showed automated results that agreed favorably to manually labeled counterparts. Adding lumen morphological features gave statistically significant improvement (p < 0.05), as compared to classification with convolutional features alone. Automated assessments of clinically relevant plaque attributes (arc angle and length), compared favorably to those from manual labels. Our hybrid approach gave statistically improved results as compared to previous A-line classification methods using deep learning or hand-crafted features alone. This plaque characterization approach is fully automated, robust, and promising for live-time treatment planning and research applications. Nature Publishing Group UK 2020-02-13 /pmc/articles/PMC7018759/ /pubmed/32054895 http://dx.doi.org/10.1038/s41598-020-59315-6 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lee, Juhwan
Prabhu, David
Kolluru, Chaitanya
Gharaibeh, Yazan
Zimin, Vladislav N.
Dallan, Luis A. P.
Bezerra, Hiram G.
Wilson, David L.
Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
title Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
title_full Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
title_fullStr Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
title_full_unstemmed Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
title_short Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
title_sort fully automated plaque characterization in intravascular oct images using hybrid convolutional and lumen morphology features
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018759/
https://www.ncbi.nlm.nih.gov/pubmed/32054895
http://dx.doi.org/10.1038/s41598-020-59315-6
work_keys_str_mv AT leejuhwan fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT prabhudavid fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT kolluruchaitanya fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT gharaibehyazan fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT ziminvladislavn fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT dallanluisap fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT bezerrahiramg fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures
AT wilsondavidl fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures