Cargando…
Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features
For intravascular OCT (IVOCT) images, we developed an automated atherosclerotic plaque characterization method that used a hybrid learning approach, which combined deep-learning convolutional and hand-crafted, lumen morphological features. Processing was done on innate A-line units with labels fibro...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018759/ https://www.ncbi.nlm.nih.gov/pubmed/32054895 http://dx.doi.org/10.1038/s41598-020-59315-6 |
_version_ | 1783497387352784896 |
---|---|
author | Lee, Juhwan Prabhu, David Kolluru, Chaitanya Gharaibeh, Yazan Zimin, Vladislav N. Dallan, Luis A. P. Bezerra, Hiram G. Wilson, David L. |
author_facet | Lee, Juhwan Prabhu, David Kolluru, Chaitanya Gharaibeh, Yazan Zimin, Vladislav N. Dallan, Luis A. P. Bezerra, Hiram G. Wilson, David L. |
author_sort | Lee, Juhwan |
collection | PubMed |
description | For intravascular OCT (IVOCT) images, we developed an automated atherosclerotic plaque characterization method that used a hybrid learning approach, which combined deep-learning convolutional and hand-crafted, lumen morphological features. Processing was done on innate A-line units with labels fibrolipidic (fibrous tissue followed by lipidous tissue), fibrocalcific (fibrous tissue followed by calcification), or other. We trained/tested on an expansive data set (6,556 images), and performed an active learning, relabeling step to improve noisy ground truth labels. Conditional random field was an important post-processing step to reduce classification errors. Sensitivities/specificities were 84.8%/97.8% and 91.4%/95.7% for fibrolipidic and fibrocalcific plaques, respectively. Over lesions, en face classification maps showed automated results that agreed favorably to manually labeled counterparts. Adding lumen morphological features gave statistically significant improvement (p < 0.05), as compared to classification with convolutional features alone. Automated assessments of clinically relevant plaque attributes (arc angle and length), compared favorably to those from manual labels. Our hybrid approach gave statistically improved results as compared to previous A-line classification methods using deep learning or hand-crafted features alone. This plaque characterization approach is fully automated, robust, and promising for live-time treatment planning and research applications. |
format | Online Article Text |
id | pubmed-7018759 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70187592020-02-21 Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features Lee, Juhwan Prabhu, David Kolluru, Chaitanya Gharaibeh, Yazan Zimin, Vladislav N. Dallan, Luis A. P. Bezerra, Hiram G. Wilson, David L. Sci Rep Article For intravascular OCT (IVOCT) images, we developed an automated atherosclerotic plaque characterization method that used a hybrid learning approach, which combined deep-learning convolutional and hand-crafted, lumen morphological features. Processing was done on innate A-line units with labels fibrolipidic (fibrous tissue followed by lipidous tissue), fibrocalcific (fibrous tissue followed by calcification), or other. We trained/tested on an expansive data set (6,556 images), and performed an active learning, relabeling step to improve noisy ground truth labels. Conditional random field was an important post-processing step to reduce classification errors. Sensitivities/specificities were 84.8%/97.8% and 91.4%/95.7% for fibrolipidic and fibrocalcific plaques, respectively. Over lesions, en face classification maps showed automated results that agreed favorably to manually labeled counterparts. Adding lumen morphological features gave statistically significant improvement (p < 0.05), as compared to classification with convolutional features alone. Automated assessments of clinically relevant plaque attributes (arc angle and length), compared favorably to those from manual labels. Our hybrid approach gave statistically improved results as compared to previous A-line classification methods using deep learning or hand-crafted features alone. This plaque characterization approach is fully automated, robust, and promising for live-time treatment planning and research applications. Nature Publishing Group UK 2020-02-13 /pmc/articles/PMC7018759/ /pubmed/32054895 http://dx.doi.org/10.1038/s41598-020-59315-6 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lee, Juhwan Prabhu, David Kolluru, Chaitanya Gharaibeh, Yazan Zimin, Vladislav N. Dallan, Luis A. P. Bezerra, Hiram G. Wilson, David L. Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features |
title | Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features |
title_full | Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features |
title_fullStr | Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features |
title_full_unstemmed | Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features |
title_short | Fully automated plaque characterization in intravascular OCT images using hybrid convolutional and lumen morphology features |
title_sort | fully automated plaque characterization in intravascular oct images using hybrid convolutional and lumen morphology features |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018759/ https://www.ncbi.nlm.nih.gov/pubmed/32054895 http://dx.doi.org/10.1038/s41598-020-59315-6 |
work_keys_str_mv | AT leejuhwan fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT prabhudavid fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT kolluruchaitanya fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT gharaibehyazan fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT ziminvladislavn fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT dallanluisap fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT bezerrahiramg fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures AT wilsondavidl fullyautomatedplaquecharacterizationinintravascularoctimagesusinghybridconvolutionalandlumenmorphologyfeatures |