Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria

Frankia sp. strain B2 was isolated from Casuarina cunninghamiana nodules. Here, we report the 5.3-Mbp draft genome sequence of Frankia sp. strain B2 with a G+C content of 70.1 % and 4,663 candidate protein-encoding genes. Analysis of the genome revealed the presence of high numbers of secondary meta...

Descripción completa

Detalles Bibliográficos
Autores principales: Belaid, Kathia, Swanson, Erik, Carré-Mlouka, Alyssa, Hocher, Valérie, Svistoonoff, Sergio, Gully, Djamel, Simpson, Stephen, Morris, Krystalynne, Thomas, W. Kelley, Amrani, Said, Tisa, Louis S., Gherbi, Hassen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2020
Materias:
Research Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7019079/
https://www.ncbi.nlm.nih.gov/pubmed/32064004
http://dx.doi.org/10.7150/jgen.38461
_version_ 1783497446588940288
author Belaid, Kathia
Swanson, Erik
Carré-Mlouka, Alyssa
Hocher, Valérie
Svistoonoff, Sergio
Gully, Djamel
Simpson, Stephen
Morris, Krystalynne
Thomas, W. Kelley
Amrani, Said
Tisa, Louis S.
Gherbi, Hassen
author_facet Belaid, Kathia
Swanson, Erik
Carré-Mlouka, Alyssa
Hocher, Valérie
Svistoonoff, Sergio
Gully, Djamel
Simpson, Stephen
Morris, Krystalynne
Thomas, W. Kelley
Amrani, Said
Tisa, Louis S.
Gherbi, Hassen
author_sort Belaid, Kathia
collection PubMed
description Frankia sp. strain B2 was isolated from Casuarina cunninghamiana nodules. Here, we report the 5.3-Mbp draft genome sequence of Frankia sp. strain B2 with a G+C content of 70.1 % and 4,663 candidate protein-encoding genes. Analysis of the genome revealed the presence of high numbers of secondary metabolic biosynthetic gene clusters.
format Online
Article
Text
id pubmed-7019079
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Ivyspring International Publisher
record_format MEDLINE/PubMed
spelling pubmed-70190792020-02-14 Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria Belaid, Kathia Swanson, Erik Carré-Mlouka, Alyssa Hocher, Valérie Svistoonoff, Sergio Gully, Djamel Simpson, Stephen Morris, Krystalynne Thomas, W. Kelley Amrani, Said Tisa, Louis S. Gherbi, Hassen J Genomics Research Paper Frankia sp. strain B2 was isolated from Casuarina cunninghamiana nodules. Here, we report the 5.3-Mbp draft genome sequence of Frankia sp. strain B2 with a G+C content of 70.1 % and 4,663 candidate protein-encoding genes. Analysis of the genome revealed the presence of high numbers of secondary metabolic biosynthetic gene clusters. Ivyspring International Publisher 2020-01-19 /pmc/articles/PMC7019079/ /pubmed/32064004 http://dx.doi.org/10.7150/jgen.38461 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Belaid, Kathia
Swanson, Erik
Carré-Mlouka, Alyssa
Hocher, Valérie
Svistoonoff, Sergio
Gully, Djamel
Simpson, Stephen
Morris, Krystalynne
Thomas, W. Kelley
Amrani, Said
Tisa, Louis S.
Gherbi, Hassen
Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria
title Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria
title_full Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria
title_fullStr Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria
title_full_unstemmed Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria
title_short Draft Genome Sequence of the Symbiotic Frankia sp. strain B2 isolated from root nodules of Casuarina cunninghamiana found in Algeria
title_sort draft genome sequence of the symbiotic frankia sp. strain b2 isolated from root nodules of casuarina cunninghamiana found in algeria
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7019079/
https://www.ncbi.nlm.nih.gov/pubmed/32064004
http://dx.doi.org/10.7150/jgen.38461
work_keys_str_mv AT belaidkathia draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT swansonerik draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT carremloukaalyssa draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT hochervalerie draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT svistoonoffsergio draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT gullydjamel draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT simpsonstephen draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT morriskrystalynne draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT thomaswkelley draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT amranisaid draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT tisalouiss draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria
AT gherbihassen draftgenomesequenceofthesymbioticfrankiaspstrainb2isolatedfromrootnodulesofcasuarinacunninghamianafoundinalgeria

Ejemplares similares