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Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges

Organic molecules and polymers have a broad range of applications in biomedical, chemical, and materials science fields. Traditional design approaches for organic molecules and polymers are mainly experimentally-driven, guided by experience, intuition, and conceptual insights. Though they have been...

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Autores principales: Chen, Guang, Shen, Zhiqiang, Iyer, Akshay, Ghumman, Umar Farooq, Tang, Shan, Bi, Jinbo, Chen, Wei, Li, Ying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7023065/
https://www.ncbi.nlm.nih.gov/pubmed/31936321
http://dx.doi.org/10.3390/polym12010163
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author Chen, Guang
Shen, Zhiqiang
Iyer, Akshay
Ghumman, Umar Farooq
Tang, Shan
Bi, Jinbo
Chen, Wei
Li, Ying
author_facet Chen, Guang
Shen, Zhiqiang
Iyer, Akshay
Ghumman, Umar Farooq
Tang, Shan
Bi, Jinbo
Chen, Wei
Li, Ying
author_sort Chen, Guang
collection PubMed
description Organic molecules and polymers have a broad range of applications in biomedical, chemical, and materials science fields. Traditional design approaches for organic molecules and polymers are mainly experimentally-driven, guided by experience, intuition, and conceptual insights. Though they have been successfully applied to discover many important materials, these methods are facing significant challenges due to the tremendous demand of new materials and vast design space of organic molecules and polymers. Accelerated and inverse materials design is an ideal solution to these challenges. With advancements in high-throughput computation, artificial intelligence (especially machining learning, ML), and the growth of materials databases, ML-assisted materials design is emerging as a promising tool to flourish breakthroughs in many areas of materials science and engineering. To date, using ML-assisted approaches, the quantitative structure property/activity relation for material property prediction can be established more accurately and efficiently. In addition, materials design can be revolutionized and accelerated much faster than ever, through ML-enabled molecular generation and inverse molecular design. In this perspective, we review the recent progresses in ML-guided design of organic molecules and polymers, highlight several successful examples, and examine future opportunities in biomedical, chemical, and materials science fields. We further discuss the relevant challenges to solve in order to fully realize the potential of ML-assisted materials design for organic molecules and polymers. In particular, this study summarizes publicly available materials databases, feature representations for organic molecules, open-source tools for feature generation, methods for molecular generation, and ML models for prediction of material properties, which serve as a tutorial for researchers who have little experience with ML before and want to apply ML for various applications. Last but not least, it draws insights into the current limitations of ML-guided design of organic molecules and polymers. We anticipate that ML-assisted materials design for organic molecules and polymers will be the driving force in the near future, to meet the tremendous demand of new materials with tailored properties in different fields.
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spelling pubmed-70230652020-03-12 Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges Chen, Guang Shen, Zhiqiang Iyer, Akshay Ghumman, Umar Farooq Tang, Shan Bi, Jinbo Chen, Wei Li, Ying Polymers (Basel) Review Organic molecules and polymers have a broad range of applications in biomedical, chemical, and materials science fields. Traditional design approaches for organic molecules and polymers are mainly experimentally-driven, guided by experience, intuition, and conceptual insights. Though they have been successfully applied to discover many important materials, these methods are facing significant challenges due to the tremendous demand of new materials and vast design space of organic molecules and polymers. Accelerated and inverse materials design is an ideal solution to these challenges. With advancements in high-throughput computation, artificial intelligence (especially machining learning, ML), and the growth of materials databases, ML-assisted materials design is emerging as a promising tool to flourish breakthroughs in many areas of materials science and engineering. To date, using ML-assisted approaches, the quantitative structure property/activity relation for material property prediction can be established more accurately and efficiently. In addition, materials design can be revolutionized and accelerated much faster than ever, through ML-enabled molecular generation and inverse molecular design. In this perspective, we review the recent progresses in ML-guided design of organic molecules and polymers, highlight several successful examples, and examine future opportunities in biomedical, chemical, and materials science fields. We further discuss the relevant challenges to solve in order to fully realize the potential of ML-assisted materials design for organic molecules and polymers. In particular, this study summarizes publicly available materials databases, feature representations for organic molecules, open-source tools for feature generation, methods for molecular generation, and ML models for prediction of material properties, which serve as a tutorial for researchers who have little experience with ML before and want to apply ML for various applications. Last but not least, it draws insights into the current limitations of ML-guided design of organic molecules and polymers. We anticipate that ML-assisted materials design for organic molecules and polymers will be the driving force in the near future, to meet the tremendous demand of new materials with tailored properties in different fields. MDPI 2020-01-08 /pmc/articles/PMC7023065/ /pubmed/31936321 http://dx.doi.org/10.3390/polym12010163 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Chen, Guang
Shen, Zhiqiang
Iyer, Akshay
Ghumman, Umar Farooq
Tang, Shan
Bi, Jinbo
Chen, Wei
Li, Ying
Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges
title Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges
title_full Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges
title_fullStr Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges
title_full_unstemmed Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges
title_short Machine-Learning-Assisted De Novo Design of Organic Molecules and Polymers: Opportunities and Challenges
title_sort machine-learning-assisted de novo design of organic molecules and polymers: opportunities and challenges
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7023065/
https://www.ncbi.nlm.nih.gov/pubmed/31936321
http://dx.doi.org/10.3390/polym12010163
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