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Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI

This paper presents a novel approach for classifying obsessive-compulsive disorder (OCD) in adolescents from resting-state fMRI data. Currently, the state-of-the-art for diagnosing OCD in youth involves interviews with adolescent patients and their parents by an experienced clinician, symptom rating...

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Autores principales: Sen, Bhaskar, Bernstein, Gail A., Mueller, Bryon A., Cullen, Kathryn R., Parhi, Keshab K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7025090/
https://www.ncbi.nlm.nih.gov/pubmed/32065968
http://dx.doi.org/10.1016/j.nicl.2020.102208
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author Sen, Bhaskar
Bernstein, Gail A.
Mueller, Bryon A.
Cullen, Kathryn R.
Parhi, Keshab K.
author_facet Sen, Bhaskar
Bernstein, Gail A.
Mueller, Bryon A.
Cullen, Kathryn R.
Parhi, Keshab K.
author_sort Sen, Bhaskar
collection PubMed
description This paper presents a novel approach for classifying obsessive-compulsive disorder (OCD) in adolescents from resting-state fMRI data. Currently, the state-of-the-art for diagnosing OCD in youth involves interviews with adolescent patients and their parents by an experienced clinician, symptom rating scales based on Diagnostic and Statistical Manual of Mental Disorders (DSM), and behavioral observation. Discovering signal processing and network-based biomarkers from functional magnetic resonance imaging (fMRI) scans of patients has the potential to assist clinicians in their diagnostic assessments of adolescents suffering from OCD. This paper investigates the clinical diagnostic utility of a set of univariate, bivariate and multivariate features extracted from resting-state fMRI using an information-theoretic approach in 15 adolescents with OCD and 13 matched healthy controls. Results indicate that an information-theoretic approach based on sub-graph entropy is capable of classifying OCD vs. healthy subjects with high accuracy. Mean time-series were extracted from 85 brain regions and were used to calculate Shannon wavelet entropy, Pearson correlation matrix, network features and sub-graph entropy. In addition, two special cases of sub-graph entropy, namely node and edge entropy, were investigated to identify important brain regions and edges from OCD patients. A leave-one-out cross-validation method was used for the final predictor performance. The proposed methodology using differential sub-graph (edge) entropy achieved an accuracy of 0.89 with specificity 1 and sensitivity 0.80 using leave-one-out cross-validation with in-fold feature ranking and selection. The high classification accuracy indicates the predictive power of the sub-network as well as edge entropy metric.
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spelling pubmed-70250902020-02-20 Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI Sen, Bhaskar Bernstein, Gail A. Mueller, Bryon A. Cullen, Kathryn R. Parhi, Keshab K. Neuroimage Clin Regular Article This paper presents a novel approach for classifying obsessive-compulsive disorder (OCD) in adolescents from resting-state fMRI data. Currently, the state-of-the-art for diagnosing OCD in youth involves interviews with adolescent patients and their parents by an experienced clinician, symptom rating scales based on Diagnostic and Statistical Manual of Mental Disorders (DSM), and behavioral observation. Discovering signal processing and network-based biomarkers from functional magnetic resonance imaging (fMRI) scans of patients has the potential to assist clinicians in their diagnostic assessments of adolescents suffering from OCD. This paper investigates the clinical diagnostic utility of a set of univariate, bivariate and multivariate features extracted from resting-state fMRI using an information-theoretic approach in 15 adolescents with OCD and 13 matched healthy controls. Results indicate that an information-theoretic approach based on sub-graph entropy is capable of classifying OCD vs. healthy subjects with high accuracy. Mean time-series were extracted from 85 brain regions and were used to calculate Shannon wavelet entropy, Pearson correlation matrix, network features and sub-graph entropy. In addition, two special cases of sub-graph entropy, namely node and edge entropy, were investigated to identify important brain regions and edges from OCD patients. A leave-one-out cross-validation method was used for the final predictor performance. The proposed methodology using differential sub-graph (edge) entropy achieved an accuracy of 0.89 with specificity 1 and sensitivity 0.80 using leave-one-out cross-validation with in-fold feature ranking and selection. The high classification accuracy indicates the predictive power of the sub-network as well as edge entropy metric. Elsevier 2020-02-06 /pmc/articles/PMC7025090/ /pubmed/32065968 http://dx.doi.org/10.1016/j.nicl.2020.102208 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Sen, Bhaskar
Bernstein, Gail A.
Mueller, Bryon A.
Cullen, Kathryn R.
Parhi, Keshab K.
Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
title Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
title_full Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
title_fullStr Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
title_full_unstemmed Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
title_short Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
title_sort sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional mri
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7025090/
https://www.ncbi.nlm.nih.gov/pubmed/32065968
http://dx.doi.org/10.1016/j.nicl.2020.102208
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