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Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI
This paper presents a novel approach for classifying obsessive-compulsive disorder (OCD) in adolescents from resting-state fMRI data. Currently, the state-of-the-art for diagnosing OCD in youth involves interviews with adolescent patients and their parents by an experienced clinician, symptom rating...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7025090/ https://www.ncbi.nlm.nih.gov/pubmed/32065968 http://dx.doi.org/10.1016/j.nicl.2020.102208 |
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author | Sen, Bhaskar Bernstein, Gail A. Mueller, Bryon A. Cullen, Kathryn R. Parhi, Keshab K. |
author_facet | Sen, Bhaskar Bernstein, Gail A. Mueller, Bryon A. Cullen, Kathryn R. Parhi, Keshab K. |
author_sort | Sen, Bhaskar |
collection | PubMed |
description | This paper presents a novel approach for classifying obsessive-compulsive disorder (OCD) in adolescents from resting-state fMRI data. Currently, the state-of-the-art for diagnosing OCD in youth involves interviews with adolescent patients and their parents by an experienced clinician, symptom rating scales based on Diagnostic and Statistical Manual of Mental Disorders (DSM), and behavioral observation. Discovering signal processing and network-based biomarkers from functional magnetic resonance imaging (fMRI) scans of patients has the potential to assist clinicians in their diagnostic assessments of adolescents suffering from OCD. This paper investigates the clinical diagnostic utility of a set of univariate, bivariate and multivariate features extracted from resting-state fMRI using an information-theoretic approach in 15 adolescents with OCD and 13 matched healthy controls. Results indicate that an information-theoretic approach based on sub-graph entropy is capable of classifying OCD vs. healthy subjects with high accuracy. Mean time-series were extracted from 85 brain regions and were used to calculate Shannon wavelet entropy, Pearson correlation matrix, network features and sub-graph entropy. In addition, two special cases of sub-graph entropy, namely node and edge entropy, were investigated to identify important brain regions and edges from OCD patients. A leave-one-out cross-validation method was used for the final predictor performance. The proposed methodology using differential sub-graph (edge) entropy achieved an accuracy of 0.89 with specificity 1 and sensitivity 0.80 using leave-one-out cross-validation with in-fold feature ranking and selection. The high classification accuracy indicates the predictive power of the sub-network as well as edge entropy metric. |
format | Online Article Text |
id | pubmed-7025090 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-70250902020-02-20 Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI Sen, Bhaskar Bernstein, Gail A. Mueller, Bryon A. Cullen, Kathryn R. Parhi, Keshab K. Neuroimage Clin Regular Article This paper presents a novel approach for classifying obsessive-compulsive disorder (OCD) in adolescents from resting-state fMRI data. Currently, the state-of-the-art for diagnosing OCD in youth involves interviews with adolescent patients and their parents by an experienced clinician, symptom rating scales based on Diagnostic and Statistical Manual of Mental Disorders (DSM), and behavioral observation. Discovering signal processing and network-based biomarkers from functional magnetic resonance imaging (fMRI) scans of patients has the potential to assist clinicians in their diagnostic assessments of adolescents suffering from OCD. This paper investigates the clinical diagnostic utility of a set of univariate, bivariate and multivariate features extracted from resting-state fMRI using an information-theoretic approach in 15 adolescents with OCD and 13 matched healthy controls. Results indicate that an information-theoretic approach based on sub-graph entropy is capable of classifying OCD vs. healthy subjects with high accuracy. Mean time-series were extracted from 85 brain regions and were used to calculate Shannon wavelet entropy, Pearson correlation matrix, network features and sub-graph entropy. In addition, two special cases of sub-graph entropy, namely node and edge entropy, were investigated to identify important brain regions and edges from OCD patients. A leave-one-out cross-validation method was used for the final predictor performance. The proposed methodology using differential sub-graph (edge) entropy achieved an accuracy of 0.89 with specificity 1 and sensitivity 0.80 using leave-one-out cross-validation with in-fold feature ranking and selection. The high classification accuracy indicates the predictive power of the sub-network as well as edge entropy metric. Elsevier 2020-02-06 /pmc/articles/PMC7025090/ /pubmed/32065968 http://dx.doi.org/10.1016/j.nicl.2020.102208 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Regular Article Sen, Bhaskar Bernstein, Gail A. Mueller, Bryon A. Cullen, Kathryn R. Parhi, Keshab K. Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI |
title | Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI |
title_full | Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI |
title_fullStr | Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI |
title_full_unstemmed | Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI |
title_short | Sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional MRI |
title_sort | sub-graph entropy based network approaches for classifying adolescent obsessive-compulsive disorder from resting-state functional mri |
topic | Regular Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7025090/ https://www.ncbi.nlm.nih.gov/pubmed/32065968 http://dx.doi.org/10.1016/j.nicl.2020.102208 |
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