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A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons
The histone demethylase LSD1 is a key chromatin regulator that is often deregulated in cancer. Its ortholog, dLsd1 plays a crucial role in Drosophila oogenesis; however, our knowledge of dLsd1 function is insufficient to explain its role in the ovary. Here, we have performed genome-wide analysis of...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7026653/ https://www.ncbi.nlm.nih.gov/pubmed/31799607 http://dx.doi.org/10.1093/nar/gkz1142 |
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author | Lepesant, Julie M J Iampietro, Carole Galeota, Eugenia Augé, Benoit Aguirrenbengoa, Marion Mercé, Clemèntine Chaubet, Camille Rocher, Vincent Haenlin, Marc Waltzer, Lucas Pelizzola, Mattia Di Stefano, Luisa |
author_facet | Lepesant, Julie M J Iampietro, Carole Galeota, Eugenia Augé, Benoit Aguirrenbengoa, Marion Mercé, Clemèntine Chaubet, Camille Rocher, Vincent Haenlin, Marc Waltzer, Lucas Pelizzola, Mattia Di Stefano, Luisa |
author_sort | Lepesant, Julie M J |
collection | PubMed |
description | The histone demethylase LSD1 is a key chromatin regulator that is often deregulated in cancer. Its ortholog, dLsd1 plays a crucial role in Drosophila oogenesis; however, our knowledge of dLsd1 function is insufficient to explain its role in the ovary. Here, we have performed genome-wide analysis of dLsd1 binding in the ovary, and we document that dLsd1 is preferentially associated to the transcription start site of developmental genes. We uncovered an unanticipated interplay between dLsd1 and the GATA transcription factor Serpent and we report an unexpected role for Serpent in oogenesis. Besides, our transcriptomic data show that reducing dLsd1 levels results in ectopic transposable elements (TE) expression correlated with changes in H3K4me2 and H3K9me2 at TE loci. In addition, our results suggest that dLsd1 is required for Piwi dependent TE silencing. Hence, we propose that dLsd1 plays crucial roles in establishing specific gene expression programs and in repressing transposons during oogenesis. |
format | Online Article Text |
id | pubmed-7026653 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-70266532020-02-25 A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons Lepesant, Julie M J Iampietro, Carole Galeota, Eugenia Augé, Benoit Aguirrenbengoa, Marion Mercé, Clemèntine Chaubet, Camille Rocher, Vincent Haenlin, Marc Waltzer, Lucas Pelizzola, Mattia Di Stefano, Luisa Nucleic Acids Res Gene regulation, Chromatin and Epigenetics The histone demethylase LSD1 is a key chromatin regulator that is often deregulated in cancer. Its ortholog, dLsd1 plays a crucial role in Drosophila oogenesis; however, our knowledge of dLsd1 function is insufficient to explain its role in the ovary. Here, we have performed genome-wide analysis of dLsd1 binding in the ovary, and we document that dLsd1 is preferentially associated to the transcription start site of developmental genes. We uncovered an unanticipated interplay between dLsd1 and the GATA transcription factor Serpent and we report an unexpected role for Serpent in oogenesis. Besides, our transcriptomic data show that reducing dLsd1 levels results in ectopic transposable elements (TE) expression correlated with changes in H3K4me2 and H3K9me2 at TE loci. In addition, our results suggest that dLsd1 is required for Piwi dependent TE silencing. Hence, we propose that dLsd1 plays crucial roles in establishing specific gene expression programs and in repressing transposons during oogenesis. Oxford University Press 2020-02-20 2019-12-04 /pmc/articles/PMC7026653/ /pubmed/31799607 http://dx.doi.org/10.1093/nar/gkz1142 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Gene regulation, Chromatin and Epigenetics Lepesant, Julie M J Iampietro, Carole Galeota, Eugenia Augé, Benoit Aguirrenbengoa, Marion Mercé, Clemèntine Chaubet, Camille Rocher, Vincent Haenlin, Marc Waltzer, Lucas Pelizzola, Mattia Di Stefano, Luisa A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons |
title | A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons |
title_full | A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons |
title_fullStr | A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons |
title_full_unstemmed | A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons |
title_short | A dual role of dLsd1 in oogenesis: regulating developmental genes and repressing transposons |
title_sort | dual role of dlsd1 in oogenesis: regulating developmental genes and repressing transposons |
topic | Gene regulation, Chromatin and Epigenetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7026653/ https://www.ncbi.nlm.nih.gov/pubmed/31799607 http://dx.doi.org/10.1093/nar/gkz1142 |
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