Cargando…

Multivariate data analysis of growth medium trends affecting antibody glycosylation

Use of multivariate data analysis for the manufacturing of biologics has been increasing due to more widespread use of data‐generating process analytical technologies (PAT) promoted by the US FDA. To generate a large dataset on which to apply these principles, we used an in‐house model CHO DG44 cell...

Descripción completa

Detalles Bibliográficos
Autores principales: Powers, David N., Trunfio, Nicholas, Velugula‐Yellela, Sai R., Angart, Phillip, Faustino, Anneliese, Agarabi, Cyrus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7027499/
https://www.ncbi.nlm.nih.gov/pubmed/31487120
http://dx.doi.org/10.1002/btpr.2903
_version_ 1783498874123452416
author Powers, David N.
Trunfio, Nicholas
Velugula‐Yellela, Sai R.
Angart, Phillip
Faustino, Anneliese
Agarabi, Cyrus
author_facet Powers, David N.
Trunfio, Nicholas
Velugula‐Yellela, Sai R.
Angart, Phillip
Faustino, Anneliese
Agarabi, Cyrus
author_sort Powers, David N.
collection PubMed
description Use of multivariate data analysis for the manufacturing of biologics has been increasing due to more widespread use of data‐generating process analytical technologies (PAT) promoted by the US FDA. To generate a large dataset on which to apply these principles, we used an in‐house model CHO DG44 cell line cultured in automated micro bioreactors alongside PAT with four commercial growth media focusing on antibody quality through N‐glycosylation profiles. Using univariate analyses, we determined that different media resulted in diverse amounts of terminal galactosylation, high mannose glycoforms, and aglycosylation. Due to the amount of in‐process data generated by PAT instrumentation, multivariate data analysis was necessary to ascertain which variables best modeled our glycan profile findings. Our principal component analysis revealed components that represent the development of glycoforms into terminally galacotosylated forms (G1F and G2F), and another that encompasses maturation out of high mannose glycoforms. The partial least squares model additionally incorporated metabolic values to link these processes to glycan outcomes, especially involving the consumption of glutamine. Overall, these approaches indicated a tradeoff between cellular productivity and product quality in terms of the glycosylation. This work illustrates the use of multivariate analytical approaches that can be applied to complex bioprocessing problems for identifying potential solutions.
format Online
Article
Text
id pubmed-7027499
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley & Sons, Inc.
record_format MEDLINE/PubMed
spelling pubmed-70274992020-02-24 Multivariate data analysis of growth medium trends affecting antibody glycosylation Powers, David N. Trunfio, Nicholas Velugula‐Yellela, Sai R. Angart, Phillip Faustino, Anneliese Agarabi, Cyrus Biotechnol Prog RESEARCH ARTICLES Use of multivariate data analysis for the manufacturing of biologics has been increasing due to more widespread use of data‐generating process analytical technologies (PAT) promoted by the US FDA. To generate a large dataset on which to apply these principles, we used an in‐house model CHO DG44 cell line cultured in automated micro bioreactors alongside PAT with four commercial growth media focusing on antibody quality through N‐glycosylation profiles. Using univariate analyses, we determined that different media resulted in diverse amounts of terminal galactosylation, high mannose glycoforms, and aglycosylation. Due to the amount of in‐process data generated by PAT instrumentation, multivariate data analysis was necessary to ascertain which variables best modeled our glycan profile findings. Our principal component analysis revealed components that represent the development of glycoforms into terminally galacotosylated forms (G1F and G2F), and another that encompasses maturation out of high mannose glycoforms. The partial least squares model additionally incorporated metabolic values to link these processes to glycan outcomes, especially involving the consumption of glutamine. Overall, these approaches indicated a tradeoff between cellular productivity and product quality in terms of the glycosylation. This work illustrates the use of multivariate analytical approaches that can be applied to complex bioprocessing problems for identifying potential solutions. John Wiley & Sons, Inc. 2019-10-18 2020 /pmc/articles/PMC7027499/ /pubmed/31487120 http://dx.doi.org/10.1002/btpr.2903 Text en © 2019 The Authors. Biotechnology Progress published by Wiley Periodicals, Inc. on behalf of American Institute of Chemical Engineers. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle RESEARCH ARTICLES
Powers, David N.
Trunfio, Nicholas
Velugula‐Yellela, Sai R.
Angart, Phillip
Faustino, Anneliese
Agarabi, Cyrus
Multivariate data analysis of growth medium trends affecting antibody glycosylation
title Multivariate data analysis of growth medium trends affecting antibody glycosylation
title_full Multivariate data analysis of growth medium trends affecting antibody glycosylation
title_fullStr Multivariate data analysis of growth medium trends affecting antibody glycosylation
title_full_unstemmed Multivariate data analysis of growth medium trends affecting antibody glycosylation
title_short Multivariate data analysis of growth medium trends affecting antibody glycosylation
title_sort multivariate data analysis of growth medium trends affecting antibody glycosylation
topic RESEARCH ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7027499/
https://www.ncbi.nlm.nih.gov/pubmed/31487120
http://dx.doi.org/10.1002/btpr.2903
work_keys_str_mv AT powersdavidn multivariatedataanalysisofgrowthmediumtrendsaffectingantibodyglycosylation
AT trunfionicholas multivariatedataanalysisofgrowthmediumtrendsaffectingantibodyglycosylation
AT velugulayellelasair multivariatedataanalysisofgrowthmediumtrendsaffectingantibodyglycosylation
AT angartphillip multivariatedataanalysisofgrowthmediumtrendsaffectingantibodyglycosylation
AT faustinoanneliese multivariatedataanalysisofgrowthmediumtrendsaffectingantibodyglycosylation
AT agarabicyrus multivariatedataanalysisofgrowthmediumtrendsaffectingantibodyglycosylation