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Multivariate data analysis of growth medium trends affecting antibody glycosylation
Use of multivariate data analysis for the manufacturing of biologics has been increasing due to more widespread use of data‐generating process analytical technologies (PAT) promoted by the US FDA. To generate a large dataset on which to apply these principles, we used an in‐house model CHO DG44 cell...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7027499/ https://www.ncbi.nlm.nih.gov/pubmed/31487120 http://dx.doi.org/10.1002/btpr.2903 |
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author | Powers, David N. Trunfio, Nicholas Velugula‐Yellela, Sai R. Angart, Phillip Faustino, Anneliese Agarabi, Cyrus |
author_facet | Powers, David N. Trunfio, Nicholas Velugula‐Yellela, Sai R. Angart, Phillip Faustino, Anneliese Agarabi, Cyrus |
author_sort | Powers, David N. |
collection | PubMed |
description | Use of multivariate data analysis for the manufacturing of biologics has been increasing due to more widespread use of data‐generating process analytical technologies (PAT) promoted by the US FDA. To generate a large dataset on which to apply these principles, we used an in‐house model CHO DG44 cell line cultured in automated micro bioreactors alongside PAT with four commercial growth media focusing on antibody quality through N‐glycosylation profiles. Using univariate analyses, we determined that different media resulted in diverse amounts of terminal galactosylation, high mannose glycoforms, and aglycosylation. Due to the amount of in‐process data generated by PAT instrumentation, multivariate data analysis was necessary to ascertain which variables best modeled our glycan profile findings. Our principal component analysis revealed components that represent the development of glycoforms into terminally galacotosylated forms (G1F and G2F), and another that encompasses maturation out of high mannose glycoforms. The partial least squares model additionally incorporated metabolic values to link these processes to glycan outcomes, especially involving the consumption of glutamine. Overall, these approaches indicated a tradeoff between cellular productivity and product quality in terms of the glycosylation. This work illustrates the use of multivariate analytical approaches that can be applied to complex bioprocessing problems for identifying potential solutions. |
format | Online Article Text |
id | pubmed-7027499 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70274992020-02-24 Multivariate data analysis of growth medium trends affecting antibody glycosylation Powers, David N. Trunfio, Nicholas Velugula‐Yellela, Sai R. Angart, Phillip Faustino, Anneliese Agarabi, Cyrus Biotechnol Prog RESEARCH ARTICLES Use of multivariate data analysis for the manufacturing of biologics has been increasing due to more widespread use of data‐generating process analytical technologies (PAT) promoted by the US FDA. To generate a large dataset on which to apply these principles, we used an in‐house model CHO DG44 cell line cultured in automated micro bioreactors alongside PAT with four commercial growth media focusing on antibody quality through N‐glycosylation profiles. Using univariate analyses, we determined that different media resulted in diverse amounts of terminal galactosylation, high mannose glycoforms, and aglycosylation. Due to the amount of in‐process data generated by PAT instrumentation, multivariate data analysis was necessary to ascertain which variables best modeled our glycan profile findings. Our principal component analysis revealed components that represent the development of glycoforms into terminally galacotosylated forms (G1F and G2F), and another that encompasses maturation out of high mannose glycoforms. The partial least squares model additionally incorporated metabolic values to link these processes to glycan outcomes, especially involving the consumption of glutamine. Overall, these approaches indicated a tradeoff between cellular productivity and product quality in terms of the glycosylation. This work illustrates the use of multivariate analytical approaches that can be applied to complex bioprocessing problems for identifying potential solutions. John Wiley & Sons, Inc. 2019-10-18 2020 /pmc/articles/PMC7027499/ /pubmed/31487120 http://dx.doi.org/10.1002/btpr.2903 Text en © 2019 The Authors. Biotechnology Progress published by Wiley Periodicals, Inc. on behalf of American Institute of Chemical Engineers. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | RESEARCH ARTICLES Powers, David N. Trunfio, Nicholas Velugula‐Yellela, Sai R. Angart, Phillip Faustino, Anneliese Agarabi, Cyrus Multivariate data analysis of growth medium trends affecting antibody glycosylation |
title | Multivariate data analysis of growth medium trends affecting antibody glycosylation |
title_full | Multivariate data analysis of growth medium trends affecting antibody glycosylation |
title_fullStr | Multivariate data analysis of growth medium trends affecting antibody glycosylation |
title_full_unstemmed | Multivariate data analysis of growth medium trends affecting antibody glycosylation |
title_short | Multivariate data analysis of growth medium trends affecting antibody glycosylation |
title_sort | multivariate data analysis of growth medium trends affecting antibody glycosylation |
topic | RESEARCH ARTICLES |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7027499/ https://www.ncbi.nlm.nih.gov/pubmed/31487120 http://dx.doi.org/10.1002/btpr.2903 |
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