Cargando…

Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation

Mutations in CYP4F22 cause autosomal recessive congenital ichthyosis (ARCI). However, less than 10% of all ARCI patients carry a mutation in CYP4F22. In order to identify the molecular basis of ARCI among our patients (a cohort of ninety-two Spanish individuals) we performed a mutational analysis us...

Descripción completa

Detalles Bibliográficos
Autores principales: Esperón-Moldes, Uxia, Ginarte-Val, Manuel, Rodríguez-Pazos, Laura, Fachal, Laura, Martín-Santiago, Ana, Vicente, Asunción, Jiménez-Gallo, David, Guillén-Navarro, Encarna, Sampol, Loreto Martorell, González-Enseñat, María Antonia, Vega, Ana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7028276/
https://www.ncbi.nlm.nih.gov/pubmed/32069299
http://dx.doi.org/10.1371/journal.pone.0229025
_version_ 1783498993398972416
author Esperón-Moldes, Uxia
Ginarte-Val, Manuel
Rodríguez-Pazos, Laura
Fachal, Laura
Martín-Santiago, Ana
Vicente, Asunción
Jiménez-Gallo, David
Guillén-Navarro, Encarna
Sampol, Loreto Martorell
González-Enseñat, María Antonia
Vega, Ana
author_facet Esperón-Moldes, Uxia
Ginarte-Val, Manuel
Rodríguez-Pazos, Laura
Fachal, Laura
Martín-Santiago, Ana
Vicente, Asunción
Jiménez-Gallo, David
Guillén-Navarro, Encarna
Sampol, Loreto Martorell
González-Enseñat, María Antonia
Vega, Ana
author_sort Esperón-Moldes, Uxia
collection PubMed
description Mutations in CYP4F22 cause autosomal recessive congenital ichthyosis (ARCI). However, less than 10% of all ARCI patients carry a mutation in CYP4F22. In order to identify the molecular basis of ARCI among our patients (a cohort of ninety-two Spanish individuals) we performed a mutational analysis using direct Sanger sequencing in combination with a multigene targeted NGS panel. From these, eight ARCI families (three of them with Moroccan origin) were found to carry five different CYP4F22 mutations, of which two were novel. Computational analysis showed that the mutations found were present in highly conserved residues of the protein and may affect its structure and function. Seven of the eight families were carriers of a highly recurrent CYP4F22 variant, c.1303C>T; p.(His435Tyr). A 12Mb haplotype was reconstructed in all c.1303C>T carriers by genotyping ten microsatellite markers flanking the CYP4F22 gene. A prevalent 2.52Mb haplotype was observed among Spanish carrier patients suggesting a recent common ancestor. A smaller core haplotype of 1.2Mb was shared by Spanish and Moroccan families. Different approaches were applied to estimate the time to the most recent common ancestor (TMRCA) of carrier patients with Spanish origin. The age of the mutation was calculated by using DMLE and BDMC2. The algorithms estimated that the c.1303C>T variant arose approximately 2925 to 4925 years ago, while Spanish carrier families derived from a common ancestor who lived in the XIII century. The present study reports five CYP4F22 mutations, two of them novel, increasing the number of CYP4F22 mutations currently listed. Additionally, our results suggest that the recurrent c.1303C>T change has a founder effect in Spanish population and c.1303C>T carrier families originated from a single ancestor with probable African ancestry.
format Online
Article
Text
id pubmed-7028276
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-70282762020-02-27 Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation Esperón-Moldes, Uxia Ginarte-Val, Manuel Rodríguez-Pazos, Laura Fachal, Laura Martín-Santiago, Ana Vicente, Asunción Jiménez-Gallo, David Guillén-Navarro, Encarna Sampol, Loreto Martorell González-Enseñat, María Antonia Vega, Ana PLoS One Research Article Mutations in CYP4F22 cause autosomal recessive congenital ichthyosis (ARCI). However, less than 10% of all ARCI patients carry a mutation in CYP4F22. In order to identify the molecular basis of ARCI among our patients (a cohort of ninety-two Spanish individuals) we performed a mutational analysis using direct Sanger sequencing in combination with a multigene targeted NGS panel. From these, eight ARCI families (three of them with Moroccan origin) were found to carry five different CYP4F22 mutations, of which two were novel. Computational analysis showed that the mutations found were present in highly conserved residues of the protein and may affect its structure and function. Seven of the eight families were carriers of a highly recurrent CYP4F22 variant, c.1303C>T; p.(His435Tyr). A 12Mb haplotype was reconstructed in all c.1303C>T carriers by genotyping ten microsatellite markers flanking the CYP4F22 gene. A prevalent 2.52Mb haplotype was observed among Spanish carrier patients suggesting a recent common ancestor. A smaller core haplotype of 1.2Mb was shared by Spanish and Moroccan families. Different approaches were applied to estimate the time to the most recent common ancestor (TMRCA) of carrier patients with Spanish origin. The age of the mutation was calculated by using DMLE and BDMC2. The algorithms estimated that the c.1303C>T variant arose approximately 2925 to 4925 years ago, while Spanish carrier families derived from a common ancestor who lived in the XIII century. The present study reports five CYP4F22 mutations, two of them novel, increasing the number of CYP4F22 mutations currently listed. Additionally, our results suggest that the recurrent c.1303C>T change has a founder effect in Spanish population and c.1303C>T carrier families originated from a single ancestor with probable African ancestry. Public Library of Science 2020-02-18 /pmc/articles/PMC7028276/ /pubmed/32069299 http://dx.doi.org/10.1371/journal.pone.0229025 Text en © 2020 Esperón-Moldes et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Esperón-Moldes, Uxia
Ginarte-Val, Manuel
Rodríguez-Pazos, Laura
Fachal, Laura
Martín-Santiago, Ana
Vicente, Asunción
Jiménez-Gallo, David
Guillén-Navarro, Encarna
Sampol, Loreto Martorell
González-Enseñat, María Antonia
Vega, Ana
Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation
title Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation
title_full Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation
title_fullStr Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation
title_full_unstemmed Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation
title_short Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation
title_sort novel cyp4f22 mutations associated with autosomal recessive congenital ichthyosis (arci). study of the cyp4f22 c.1303c>t founder mutation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7028276/
https://www.ncbi.nlm.nih.gov/pubmed/32069299
http://dx.doi.org/10.1371/journal.pone.0229025
work_keys_str_mv AT esperonmoldesuxia novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT ginartevalmanuel novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT rodriguezpazoslaura novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT fachallaura novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT martinsantiagoana novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT vicenteasuncion novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT jimenezgallodavid novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT guillennavarroencarna novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT sampolloretomartorell novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT gonzalezensenatmariaantonia novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation
AT vegaana novelcyp4f22mutationsassociatedwithautosomalrecessivecongenitalichthyosisarcistudyofthecyp4f22c1303ctfoundermutation