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Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts

Ascosphaera apis is an obligate fungal pathogen of honeybee larvae that leads to chalkbrood, which causes heavy losses for the apiculture in China and many other countries. In this article, guts of 4-, 5-, 6-day-old Apis mellifera ligustica larvae challenged by A. apis (AmT1, AmT2, AmT3) and normal...

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Autores principales: Chen, Huazhi, Du, Yu, Zhu, Zhiwei, Xiong, Cuiling, Zheng, Yanzhen, Chen, Dafu, Guo, Rui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7029161/
https://www.ncbi.nlm.nih.gov/pubmed/32099884
http://dx.doi.org/10.1016/j.dib.2020.105264
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author Chen, Huazhi
Du, Yu
Zhu, Zhiwei
Xiong, Cuiling
Zheng, Yanzhen
Chen, Dafu
Guo, Rui
author_facet Chen, Huazhi
Du, Yu
Zhu, Zhiwei
Xiong, Cuiling
Zheng, Yanzhen
Chen, Dafu
Guo, Rui
author_sort Chen, Huazhi
collection PubMed
description Ascosphaera apis is an obligate fungal pathogen of honeybee larvae that leads to chalkbrood, which causes heavy losses for the apiculture in China and many other countries. In this article, guts of 4-, 5-, 6-day-old Apis mellifera ligustica larvae challenged by A. apis (AmT1, AmT2, AmT3) and normal 4-day-old larval guts (AmCK) were sequenced using next-generation sequencing technology. On average, 29,196,197, 28,690,943, 29,779,715 and 30,496,725 raw reads were yielded from these four groups; an average of 29,540,895 clean reads were obtained after quality control. In addition, the mapping ratio of clean reads in treatment and control groups to the Apis mellifera genome were over 97.16%. For more insight please see “Uncovering the immune responses of Apis mellifera ligustica larval gut to Ascosphaera apis infection utilizing transcriptome sequencing” [1]. The raw data were submitted to the National Centre for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database under accession numbers: SRR4084091, SRR4084092, SRR4084095, SRR4084096, SRR4084097, SRR4084098, SRR4084099, SRR4084100, SRR4084101, SRR4084102, SRR4084093, SRR4084094.
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spelling pubmed-70291612020-02-25 Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts Chen, Huazhi Du, Yu Zhu, Zhiwei Xiong, Cuiling Zheng, Yanzhen Chen, Dafu Guo, Rui Data Brief Biochemistry, Genetics and Molecular Biology Ascosphaera apis is an obligate fungal pathogen of honeybee larvae that leads to chalkbrood, which causes heavy losses for the apiculture in China and many other countries. In this article, guts of 4-, 5-, 6-day-old Apis mellifera ligustica larvae challenged by A. apis (AmT1, AmT2, AmT3) and normal 4-day-old larval guts (AmCK) were sequenced using next-generation sequencing technology. On average, 29,196,197, 28,690,943, 29,779,715 and 30,496,725 raw reads were yielded from these four groups; an average of 29,540,895 clean reads were obtained after quality control. In addition, the mapping ratio of clean reads in treatment and control groups to the Apis mellifera genome were over 97.16%. For more insight please see “Uncovering the immune responses of Apis mellifera ligustica larval gut to Ascosphaera apis infection utilizing transcriptome sequencing” [1]. The raw data were submitted to the National Centre for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database under accession numbers: SRR4084091, SRR4084092, SRR4084095, SRR4084096, SRR4084097, SRR4084098, SRR4084099, SRR4084100, SRR4084101, SRR4084102, SRR4084093, SRR4084094. Elsevier 2020-02-08 /pmc/articles/PMC7029161/ /pubmed/32099884 http://dx.doi.org/10.1016/j.dib.2020.105264 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Chen, Huazhi
Du, Yu
Zhu, Zhiwei
Xiong, Cuiling
Zheng, Yanzhen
Chen, Dafu
Guo, Rui
Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts
title Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts
title_full Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts
title_fullStr Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts
title_full_unstemmed Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts
title_short Transcriptome data of control and Ascosphaera apis infected Apis mellifera ligustica larval guts
title_sort transcriptome data of control and ascosphaera apis infected apis mellifera ligustica larval guts
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7029161/
https://www.ncbi.nlm.nih.gov/pubmed/32099884
http://dx.doi.org/10.1016/j.dib.2020.105264
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