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Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence
BACKGROUND: Esophageal carcinoma is a malignant gastrointestinal tumor with a very poor prognosis. MicroRNA (miR)-1304 is a newly discovered non-coding RNA, which shows differential expression in other cancers, and its clinical value in esophageal carcinoma remains unclear. AIM: To explore the expre...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Baishideng Publishing Group Inc
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7029348/ https://www.ncbi.nlm.nih.gov/pubmed/32103875 http://dx.doi.org/10.3748/wjg.v26.i6.670 |
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author | Luo, Yun-Gang Duan, Li-Wei Ji, Xuan Jia, Wen-Yuan Liu, Yun Sun, Mao-Lei Liu, Guo-Min |
author_facet | Luo, Yun-Gang Duan, Li-Wei Ji, Xuan Jia, Wen-Yuan Liu, Yun Sun, Mao-Lei Liu, Guo-Min |
author_sort | Luo, Yun-Gang |
collection | PubMed |
description | BACKGROUND: Esophageal carcinoma is a malignant gastrointestinal tumor with a very poor prognosis. MicroRNA (miR)-1304 is a newly discovered non-coding RNA, which shows differential expression in other cancers, and its clinical value in esophageal carcinoma remains unclear. AIM: To explore the expression of miR-1304 in patients with esophageal carcinoma and its clinical value. METHODS: The expression of miR-1304 in patients with esophageal carcinoma was analyzed based on the data on miR in esophageal carcinoma downloaded from The Cancer Genome Atlas database. Quantitative real-time polymerase chain reaction was adopted to determine the expression of miR-1304 in the tissues and serum of patients. The clinical diagnostic value of miR-1304 and independent factors for recurrence and prognosis of esophageal carcinoma were then analyzed. The potential target genes of miR-1304 were predicted, and then analyzed based on gene ontology, Kyoto Encyclopedia of Genes, and Genomes, and protein-protein interaction. RESULTS: The expression of miR-1304 in the tissues and serum of patients with esophageal carcinoma increased, and was also increased according to the database. Patients with high expression of miR-1304 suffered increased rates of tumor ≥ 3 cm, low differentiation and stage II + III. miR-1304 had a diagnostic value in identifying esophageal carcinoma, tumor size, differentiation and TNM stage. Tumor size, differentiation, TNM stage, and miR-1304 were independent risk factors for recurrence of esophageal carcinoma, and they had certain predictive and diagnostic value for the recurrence of esophageal carcinoma. Seventy-eight patients showed a 3-year survival rate of 38.46%, and patients with high expression of miR-1304 had a relatively lower survival rate. Multivariate analysis revealed that tumor size, differentiation, recurrence and miR-1304 were independent factors for the prognosis of patients. MiRTarBase, miRDB, and Targetscan predicted 20 target genes in total. Gene ontology enrichment analysis found 18 functions with (a)P < 0.05, and Kyoto Encyclopedia of Genes, and Genomes analysis found 11 signal pathways with (a)P < 0.05. String analysis of protein co-expression found 269 relationship pairs, of which co-expression with epidermal growth factor was the most common. CONCLUSION: miR-1304 can be used as a potential indicator for the diagnosis and recurrence of esophageal carcinoma and for survival of patients with this disease. |
format | Online Article Text |
id | pubmed-7029348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Baishideng Publishing Group Inc |
record_format | MEDLINE/PubMed |
spelling | pubmed-70293482020-02-26 Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence Luo, Yun-Gang Duan, Li-Wei Ji, Xuan Jia, Wen-Yuan Liu, Yun Sun, Mao-Lei Liu, Guo-Min World J Gastroenterol Observational Study BACKGROUND: Esophageal carcinoma is a malignant gastrointestinal tumor with a very poor prognosis. MicroRNA (miR)-1304 is a newly discovered non-coding RNA, which shows differential expression in other cancers, and its clinical value in esophageal carcinoma remains unclear. AIM: To explore the expression of miR-1304 in patients with esophageal carcinoma and its clinical value. METHODS: The expression of miR-1304 in patients with esophageal carcinoma was analyzed based on the data on miR in esophageal carcinoma downloaded from The Cancer Genome Atlas database. Quantitative real-time polymerase chain reaction was adopted to determine the expression of miR-1304 in the tissues and serum of patients. The clinical diagnostic value of miR-1304 and independent factors for recurrence and prognosis of esophageal carcinoma were then analyzed. The potential target genes of miR-1304 were predicted, and then analyzed based on gene ontology, Kyoto Encyclopedia of Genes, and Genomes, and protein-protein interaction. RESULTS: The expression of miR-1304 in the tissues and serum of patients with esophageal carcinoma increased, and was also increased according to the database. Patients with high expression of miR-1304 suffered increased rates of tumor ≥ 3 cm, low differentiation and stage II + III. miR-1304 had a diagnostic value in identifying esophageal carcinoma, tumor size, differentiation and TNM stage. Tumor size, differentiation, TNM stage, and miR-1304 were independent risk factors for recurrence of esophageal carcinoma, and they had certain predictive and diagnostic value for the recurrence of esophageal carcinoma. Seventy-eight patients showed a 3-year survival rate of 38.46%, and patients with high expression of miR-1304 had a relatively lower survival rate. Multivariate analysis revealed that tumor size, differentiation, recurrence and miR-1304 were independent factors for the prognosis of patients. MiRTarBase, miRDB, and Targetscan predicted 20 target genes in total. Gene ontology enrichment analysis found 18 functions with (a)P < 0.05, and Kyoto Encyclopedia of Genes, and Genomes analysis found 11 signal pathways with (a)P < 0.05. String analysis of protein co-expression found 269 relationship pairs, of which co-expression with epidermal growth factor was the most common. CONCLUSION: miR-1304 can be used as a potential indicator for the diagnosis and recurrence of esophageal carcinoma and for survival of patients with this disease. Baishideng Publishing Group Inc 2020-02-14 2020-02-14 /pmc/articles/PMC7029348/ /pubmed/32103875 http://dx.doi.org/10.3748/wjg.v26.i6.670 Text en ©The Author(s) 2020. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. |
spellingShingle | Observational Study Luo, Yun-Gang Duan, Li-Wei Ji, Xuan Jia, Wen-Yuan Liu, Yun Sun, Mao-Lei Liu, Guo-Min Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence |
title | Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence |
title_full | Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence |
title_fullStr | Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence |
title_full_unstemmed | Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence |
title_short | Expression of miR-1304 in patients with esophageal carcinoma and risk factors for recurrence |
title_sort | expression of mir-1304 in patients with esophageal carcinoma and risk factors for recurrence |
topic | Observational Study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7029348/ https://www.ncbi.nlm.nih.gov/pubmed/32103875 http://dx.doi.org/10.3748/wjg.v26.i6.670 |
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