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Optimal Multi-Stage Arrhythmia Classification Approach
Arrhythmia constitutes a problem with the rate or rhythm of the heartbeat, and an early diagnosis is essential for the timely inception of successful treatment. We have jointly optimized the entire multi-stage arrhythmia classification scheme based on 12-lead surface ECGs that attains the accuracy p...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031229/ https://www.ncbi.nlm.nih.gov/pubmed/32076033 http://dx.doi.org/10.1038/s41598-020-59821-7 |
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author | Zheng, Jianwei Chu, Huimin Struppa, Daniele Zhang, Jianming Yacoub, Sir Magdi El-Askary, Hesham Chang, Anthony Ehwerhemuepha, Louis Abudayyeh, Islam Barrett, Alexander Fu, Guohua Yao, Hai Li, Dongbo Guo, Hangyuan Rakovski, Cyril |
author_facet | Zheng, Jianwei Chu, Huimin Struppa, Daniele Zhang, Jianming Yacoub, Sir Magdi El-Askary, Hesham Chang, Anthony Ehwerhemuepha, Louis Abudayyeh, Islam Barrett, Alexander Fu, Guohua Yao, Hai Li, Dongbo Guo, Hangyuan Rakovski, Cyril |
author_sort | Zheng, Jianwei |
collection | PubMed |
description | Arrhythmia constitutes a problem with the rate or rhythm of the heartbeat, and an early diagnosis is essential for the timely inception of successful treatment. We have jointly optimized the entire multi-stage arrhythmia classification scheme based on 12-lead surface ECGs that attains the accuracy performance level of professional cardiologists. The new approach is comprised of a three-step noise reduction stage, a novel feature extraction method and an optimal classification model with finely tuned hyperparameters. We carried out an exhaustive study comparing thousands of competing classification algorithms that were trained on our proprietary, large and expertly labeled dataset consisting of 12-lead ECGs from 40,258 patients with four arrhythmia classes: atrial fibrillation, general supraventricular tachycardia, sinus bradycardia and sinus rhythm including sinus irregularity rhythm. Our results show that the optimal approach consisted of Low Band Pass filter, Robust LOESS, Non Local Means smoothing, a proprietary feature extraction method based on percentiles of the empirical distribution of ratios of interval lengths and magnitudes of peaks and valleys, and Extreme Gradient Boosting Tree classifier, achieved an F(1)-Score of 0.988 on patients without additional cardiac conditions. The same noise reduction and feature extraction methods combined with Gradient Boosting Tree classifier achieved an F(1)-Score of 0.97 on patients with additional cardiac conditions. Our method achieved the highest classification accuracy (average 10-fold cross-validation F(1)-Score of 0.992) using an external validation data, MIT-BIH arrhythmia database. The proposed optimal multi-stage arrhythmia classification approach can dramatically benefit automatic ECG data analysis by providing cardiologist level accuracy and robust compatibility with various ECG data sources. |
format | Online Article Text |
id | pubmed-7031229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70312292020-02-26 Optimal Multi-Stage Arrhythmia Classification Approach Zheng, Jianwei Chu, Huimin Struppa, Daniele Zhang, Jianming Yacoub, Sir Magdi El-Askary, Hesham Chang, Anthony Ehwerhemuepha, Louis Abudayyeh, Islam Barrett, Alexander Fu, Guohua Yao, Hai Li, Dongbo Guo, Hangyuan Rakovski, Cyril Sci Rep Article Arrhythmia constitutes a problem with the rate or rhythm of the heartbeat, and an early diagnosis is essential for the timely inception of successful treatment. We have jointly optimized the entire multi-stage arrhythmia classification scheme based on 12-lead surface ECGs that attains the accuracy performance level of professional cardiologists. The new approach is comprised of a three-step noise reduction stage, a novel feature extraction method and an optimal classification model with finely tuned hyperparameters. We carried out an exhaustive study comparing thousands of competing classification algorithms that were trained on our proprietary, large and expertly labeled dataset consisting of 12-lead ECGs from 40,258 patients with four arrhythmia classes: atrial fibrillation, general supraventricular tachycardia, sinus bradycardia and sinus rhythm including sinus irregularity rhythm. Our results show that the optimal approach consisted of Low Band Pass filter, Robust LOESS, Non Local Means smoothing, a proprietary feature extraction method based on percentiles of the empirical distribution of ratios of interval lengths and magnitudes of peaks and valleys, and Extreme Gradient Boosting Tree classifier, achieved an F(1)-Score of 0.988 on patients without additional cardiac conditions. The same noise reduction and feature extraction methods combined with Gradient Boosting Tree classifier achieved an F(1)-Score of 0.97 on patients with additional cardiac conditions. Our method achieved the highest classification accuracy (average 10-fold cross-validation F(1)-Score of 0.992) using an external validation data, MIT-BIH arrhythmia database. The proposed optimal multi-stage arrhythmia classification approach can dramatically benefit automatic ECG data analysis by providing cardiologist level accuracy and robust compatibility with various ECG data sources. Nature Publishing Group UK 2020-02-19 /pmc/articles/PMC7031229/ /pubmed/32076033 http://dx.doi.org/10.1038/s41598-020-59821-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Zheng, Jianwei Chu, Huimin Struppa, Daniele Zhang, Jianming Yacoub, Sir Magdi El-Askary, Hesham Chang, Anthony Ehwerhemuepha, Louis Abudayyeh, Islam Barrett, Alexander Fu, Guohua Yao, Hai Li, Dongbo Guo, Hangyuan Rakovski, Cyril Optimal Multi-Stage Arrhythmia Classification Approach |
title | Optimal Multi-Stage Arrhythmia Classification Approach |
title_full | Optimal Multi-Stage Arrhythmia Classification Approach |
title_fullStr | Optimal Multi-Stage Arrhythmia Classification Approach |
title_full_unstemmed | Optimal Multi-Stage Arrhythmia Classification Approach |
title_short | Optimal Multi-Stage Arrhythmia Classification Approach |
title_sort | optimal multi-stage arrhythmia classification approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031229/ https://www.ncbi.nlm.nih.gov/pubmed/32076033 http://dx.doi.org/10.1038/s41598-020-59821-7 |
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