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Organohalide-respiring Desulfoluna species isolated from marine environments

The genus Desulfoluna comprises two anaerobic sulfate-reducing strains, D. spongiiphila AA1(T) and D. butyratoxydans MSL71(T), of which only the former was shown to perform organohalide respiration (OHR). Here we isolated a third strain, designated D. spongiiphila strain DBB, from marine intertidal...

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Autores principales: Peng, Peng, Goris, Tobias, Lu, Yue, Nijsse, Bart, Burrichter, Anna, Schleheck, David, Koehorst, Jasper J., Liu, Jie, Sipkema, Detmer, Sinninghe Damste, Jaap S., Stams, Alfons J. M., Häggblom, Max M., Smidt, Hauke, Atashgahi, Siavash
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031245/
https://www.ncbi.nlm.nih.gov/pubmed/31896791
http://dx.doi.org/10.1038/s41396-019-0573-y
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author Peng, Peng
Goris, Tobias
Lu, Yue
Nijsse, Bart
Burrichter, Anna
Schleheck, David
Koehorst, Jasper J.
Liu, Jie
Sipkema, Detmer
Sinninghe Damste, Jaap S.
Stams, Alfons J. M.
Häggblom, Max M.
Smidt, Hauke
Atashgahi, Siavash
author_facet Peng, Peng
Goris, Tobias
Lu, Yue
Nijsse, Bart
Burrichter, Anna
Schleheck, David
Koehorst, Jasper J.
Liu, Jie
Sipkema, Detmer
Sinninghe Damste, Jaap S.
Stams, Alfons J. M.
Häggblom, Max M.
Smidt, Hauke
Atashgahi, Siavash
author_sort Peng, Peng
collection PubMed
description The genus Desulfoluna comprises two anaerobic sulfate-reducing strains, D. spongiiphila AA1(T) and D. butyratoxydans MSL71(T), of which only the former was shown to perform organohalide respiration (OHR). Here we isolated a third strain, designated D. spongiiphila strain DBB, from marine intertidal sediment using 1,4-dibromobenzene and sulfate as the electron acceptors and lactate as the electron donor. Each strain harbors three reductive dehalogenase gene clusters (rdhABC) and corrinoid biosynthesis genes in their genomes, and dehalogenated brominated but not chlorinated organohalogens. The Desulfoluna strains maintained OHR in the presence of 20 mM sulfate or 20 mM sulfide, which often negatively affect other organohalide-respiring bacteria. Strain DBB sustained OHR with 2% oxygen in the gas phase, in line with its genetic potential for reactive oxygen species detoxification. Reverse transcription-quantitative PCR revealed differential induction of rdhA genes in strain DBB in response to 1,4-dibromobenzene or 2,6-dibromophenol. Proteomic analysis confirmed expression of rdhA1 with 1,4-dibromobenzene, and revealed a partially shared electron transport chain from lactate to 1,4-dibromobenzene and sulfate, which may explain accelerated OHR during concurrent sulfate reduction. Versatility in using electron donors, de novo corrinoid biosynthesis, resistance to sulfate, sulfide and oxygen, and concurrent sulfate reduction and OHR may confer an advantage to marine Desulfoluna strains.
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spelling pubmed-70312452020-03-04 Organohalide-respiring Desulfoluna species isolated from marine environments Peng, Peng Goris, Tobias Lu, Yue Nijsse, Bart Burrichter, Anna Schleheck, David Koehorst, Jasper J. Liu, Jie Sipkema, Detmer Sinninghe Damste, Jaap S. Stams, Alfons J. M. Häggblom, Max M. Smidt, Hauke Atashgahi, Siavash ISME J Article The genus Desulfoluna comprises two anaerobic sulfate-reducing strains, D. spongiiphila AA1(T) and D. butyratoxydans MSL71(T), of which only the former was shown to perform organohalide respiration (OHR). Here we isolated a third strain, designated D. spongiiphila strain DBB, from marine intertidal sediment using 1,4-dibromobenzene and sulfate as the electron acceptors and lactate as the electron donor. Each strain harbors three reductive dehalogenase gene clusters (rdhABC) and corrinoid biosynthesis genes in their genomes, and dehalogenated brominated but not chlorinated organohalogens. The Desulfoluna strains maintained OHR in the presence of 20 mM sulfate or 20 mM sulfide, which often negatively affect other organohalide-respiring bacteria. Strain DBB sustained OHR with 2% oxygen in the gas phase, in line with its genetic potential for reactive oxygen species detoxification. Reverse transcription-quantitative PCR revealed differential induction of rdhA genes in strain DBB in response to 1,4-dibromobenzene or 2,6-dibromophenol. Proteomic analysis confirmed expression of rdhA1 with 1,4-dibromobenzene, and revealed a partially shared electron transport chain from lactate to 1,4-dibromobenzene and sulfate, which may explain accelerated OHR during concurrent sulfate reduction. Versatility in using electron donors, de novo corrinoid biosynthesis, resistance to sulfate, sulfide and oxygen, and concurrent sulfate reduction and OHR may confer an advantage to marine Desulfoluna strains. Nature Publishing Group UK 2020-01-02 2020-03 /pmc/articles/PMC7031245/ /pubmed/31896791 http://dx.doi.org/10.1038/s41396-019-0573-y Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Peng, Peng
Goris, Tobias
Lu, Yue
Nijsse, Bart
Burrichter, Anna
Schleheck, David
Koehorst, Jasper J.
Liu, Jie
Sipkema, Detmer
Sinninghe Damste, Jaap S.
Stams, Alfons J. M.
Häggblom, Max M.
Smidt, Hauke
Atashgahi, Siavash
Organohalide-respiring Desulfoluna species isolated from marine environments
title Organohalide-respiring Desulfoluna species isolated from marine environments
title_full Organohalide-respiring Desulfoluna species isolated from marine environments
title_fullStr Organohalide-respiring Desulfoluna species isolated from marine environments
title_full_unstemmed Organohalide-respiring Desulfoluna species isolated from marine environments
title_short Organohalide-respiring Desulfoluna species isolated from marine environments
title_sort organohalide-respiring desulfoluna species isolated from marine environments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031245/
https://www.ncbi.nlm.nih.gov/pubmed/31896791
http://dx.doi.org/10.1038/s41396-019-0573-y
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