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A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes
Adiponectin is a prime determinant of the status of insulin resistance. Association studies between adiponectin (ADIPOQ) gene single nucleotide polymorphisms (SNPs) and metabolic diseases have been reported earlier. However, results are ambiguous due to apparent contradictions. Hence, we investigate...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031532/ https://www.ncbi.nlm.nih.gov/pubmed/32076038 http://dx.doi.org/10.1038/s41598-020-59845-z |
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author | Palit, Sayantani Pramanik Patel, Roma Jadeja, Shahnawaz D. Rathwa, Nirali Mahajan, Ankit Ramachandran, A. V. Dhar, Manoj K. Sharma, Swarkar Begum, Rasheedunnisa |
author_facet | Palit, Sayantani Pramanik Patel, Roma Jadeja, Shahnawaz D. Rathwa, Nirali Mahajan, Ankit Ramachandran, A. V. Dhar, Manoj K. Sharma, Swarkar Begum, Rasheedunnisa |
author_sort | Palit, Sayantani Pramanik |
collection | PubMed |
description | Adiponectin is a prime determinant of the status of insulin resistance. Association studies between adiponectin (ADIPOQ) gene single nucleotide polymorphisms (SNPs) and metabolic diseases have been reported earlier. However, results are ambiguous due to apparent contradictions. Hence, we investigated (1) the association between ADIPOQ SNPs: −11377C/G, +10211T/G, +45T/G and +276G/T for the risk towards type 2 diabetes (T2D) and, (2) genotype-phenotype association of these SNPs with various biochemical parameters in two cohorts. Genomic DNA of diabetic patients and controls from Gujarat and, Jammu and Kashmir (J&K) were genotyped using PCR-RFLP, TaqMan assay and MassArray. Transcript levels of ADIPOQ were assessed in visceral adipose tissue samples, and plasma adiponectin levels were estimated by qPCR and ELISA respectively. Results suggest: (i) reduced HMW adiponectin/total adiponectin ratio in Gujarat patients and its association with +10211T/G and +276G/T, and reduced ADIPOQ transcript levels in T2D, (ii) association of the above SNPs with increased FBG, BMI, TG, TC in Gujarat patients and (iii) increased GGTG haplotype in obese patients of Gujarat population and, (iv) association of −11377C/G with T2D in J&K population. Reduced HMW adiponectin, in the backdrop of obesity and ADIPOQ genetic variants might alter metabolic profile posing risk towards T2D. |
format | Online Article Text |
id | pubmed-7031532 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70315322020-02-27 A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes Palit, Sayantani Pramanik Patel, Roma Jadeja, Shahnawaz D. Rathwa, Nirali Mahajan, Ankit Ramachandran, A. V. Dhar, Manoj K. Sharma, Swarkar Begum, Rasheedunnisa Sci Rep Article Adiponectin is a prime determinant of the status of insulin resistance. Association studies between adiponectin (ADIPOQ) gene single nucleotide polymorphisms (SNPs) and metabolic diseases have been reported earlier. However, results are ambiguous due to apparent contradictions. Hence, we investigated (1) the association between ADIPOQ SNPs: −11377C/G, +10211T/G, +45T/G and +276G/T for the risk towards type 2 diabetes (T2D) and, (2) genotype-phenotype association of these SNPs with various biochemical parameters in two cohorts. Genomic DNA of diabetic patients and controls from Gujarat and, Jammu and Kashmir (J&K) were genotyped using PCR-RFLP, TaqMan assay and MassArray. Transcript levels of ADIPOQ were assessed in visceral adipose tissue samples, and plasma adiponectin levels were estimated by qPCR and ELISA respectively. Results suggest: (i) reduced HMW adiponectin/total adiponectin ratio in Gujarat patients and its association with +10211T/G and +276G/T, and reduced ADIPOQ transcript levels in T2D, (ii) association of the above SNPs with increased FBG, BMI, TG, TC in Gujarat patients and (iii) increased GGTG haplotype in obese patients of Gujarat population and, (iv) association of −11377C/G with T2D in J&K population. Reduced HMW adiponectin, in the backdrop of obesity and ADIPOQ genetic variants might alter metabolic profile posing risk towards T2D. Nature Publishing Group UK 2020-02-19 /pmc/articles/PMC7031532/ /pubmed/32076038 http://dx.doi.org/10.1038/s41598-020-59845-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Palit, Sayantani Pramanik Patel, Roma Jadeja, Shahnawaz D. Rathwa, Nirali Mahajan, Ankit Ramachandran, A. V. Dhar, Manoj K. Sharma, Swarkar Begum, Rasheedunnisa A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes |
title | A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes |
title_full | A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes |
title_fullStr | A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes |
title_full_unstemmed | A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes |
title_short | A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes |
title_sort | genetic analysis identifies a haplotype at adiponectin locus: association with obesity and type 2 diabetes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031532/ https://www.ncbi.nlm.nih.gov/pubmed/32076038 http://dx.doi.org/10.1038/s41598-020-59845-z |
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