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A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China

To develop a classification model for accurately discriminating common infectious diseases in Zhejiang province, China. Symptoms and signs, abnormal lab test results, epidemiological features, as well as the incidence rates were treated as predictors, and were collected from the published literature...

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Autores principales: Li, Fudong, Shen, Yi, Lv, Duo, Lin, Junfen, Liu, Biyao, He, Fan, Wang, Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7034623/
https://www.ncbi.nlm.nih.gov/pubmed/32080115
http://dx.doi.org/10.1097/MD.0000000000019218
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author Li, Fudong
Shen, Yi
Lv, Duo
Lin, Junfen
Liu, Biyao
He, Fan
Wang, Zhen
author_facet Li, Fudong
Shen, Yi
Lv, Duo
Lin, Junfen
Liu, Biyao
He, Fan
Wang, Zhen
author_sort Li, Fudong
collection PubMed
description To develop a classification model for accurately discriminating common infectious diseases in Zhejiang province, China. Symptoms and signs, abnormal lab test results, epidemiological features, as well as the incidence rates were treated as predictors, and were collected from the published literature and a national surveillance system of infectious disease. A classification model was established using naïve Bayesian classifier. Dataset from historical outbreaks was applied for model validation, while sensitivity, specificity, accuracy, area under the receiver operating characteristic curve (AUC) and M-index were presented. A total of 146 predictors were included in the classification model, for discriminating 25 common infectious diseases. The sensitivity ranged from 44.44% for hepatitis E to 96.67% for measles. The specificity varied from 96.36% for dengue fever to 100% for 5 diseases. The median of total accuracy was 97.41% (range: 93.85%–99.04%). The AUCs exceeded 0.98 in 11 of 12 diseases, except in dengue fever (0.613). The M-index was 0.960 (95%CI 0.941–0.978). A novel classification model was constructed based on Bayesian approach to discriminate common infectious diseases in Zhejiang province, China. After entering symptoms and signs, abnormal lab test results, epidemiological features and city of disease origin, an output list of possible diseases ranked according to the calculated probabilities can be provided. The discrimination performance was reasonably good, making it useful in epidemiological applications.
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spelling pubmed-70346232020-03-10 A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China Li, Fudong Shen, Yi Lv, Duo Lin, Junfen Liu, Biyao He, Fan Wang, Zhen Medicine (Baltimore) 6600 To develop a classification model for accurately discriminating common infectious diseases in Zhejiang province, China. Symptoms and signs, abnormal lab test results, epidemiological features, as well as the incidence rates were treated as predictors, and were collected from the published literature and a national surveillance system of infectious disease. A classification model was established using naïve Bayesian classifier. Dataset from historical outbreaks was applied for model validation, while sensitivity, specificity, accuracy, area under the receiver operating characteristic curve (AUC) and M-index were presented. A total of 146 predictors were included in the classification model, for discriminating 25 common infectious diseases. The sensitivity ranged from 44.44% for hepatitis E to 96.67% for measles. The specificity varied from 96.36% for dengue fever to 100% for 5 diseases. The median of total accuracy was 97.41% (range: 93.85%–99.04%). The AUCs exceeded 0.98 in 11 of 12 diseases, except in dengue fever (0.613). The M-index was 0.960 (95%CI 0.941–0.978). A novel classification model was constructed based on Bayesian approach to discriminate common infectious diseases in Zhejiang province, China. After entering symptoms and signs, abnormal lab test results, epidemiological features and city of disease origin, an output list of possible diseases ranked according to the calculated probabilities can be provided. The discrimination performance was reasonably good, making it useful in epidemiological applications. Wolters Kluwer Health 2020-02-21 /pmc/articles/PMC7034623/ /pubmed/32080115 http://dx.doi.org/10.1097/MD.0000000000019218 Text en Copyright © 2020 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0
spellingShingle 6600
Li, Fudong
Shen, Yi
Lv, Duo
Lin, Junfen
Liu, Biyao
He, Fan
Wang, Zhen
A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China
title A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China
title_full A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China
title_fullStr A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China
title_full_unstemmed A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China
title_short A Bayesian classification model for discriminating common infectious diseases in Zhejiang province, China
title_sort bayesian classification model for discriminating common infectious diseases in zhejiang province, china
topic 6600
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7034623/
https://www.ncbi.nlm.nih.gov/pubmed/32080115
http://dx.doi.org/10.1097/MD.0000000000019218
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