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iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification

With the advent of personalized medicine, there is a movement to develop “smaller” and “smarter” microdevices that are able to distinguish similar cancer subtypes. Tumor cells display major differences when compared to their natural counterparts, due to alterations in fundamental cellular processes...

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Autores principales: Paiva, Joana S., Jorge, Pedro A. S., Ribeiro, Rita S. R., Balmaña, Meritxell, Campos, Diana, Mereiter, Stefan, Jin, Chunsheng, Karlsson, Niclas G., Sampaio, Paula, Reis, Celso A., Cunha, João P. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7035380/
https://www.ncbi.nlm.nih.gov/pubmed/32081911
http://dx.doi.org/10.1038/s41598-020-59661-5
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author Paiva, Joana S.
Jorge, Pedro A. S.
Ribeiro, Rita S. R.
Balmaña, Meritxell
Campos, Diana
Mereiter, Stefan
Jin, Chunsheng
Karlsson, Niclas G.
Sampaio, Paula
Reis, Celso A.
Cunha, João P. S.
author_facet Paiva, Joana S.
Jorge, Pedro A. S.
Ribeiro, Rita S. R.
Balmaña, Meritxell
Campos, Diana
Mereiter, Stefan
Jin, Chunsheng
Karlsson, Niclas G.
Sampaio, Paula
Reis, Celso A.
Cunha, João P. S.
author_sort Paiva, Joana S.
collection PubMed
description With the advent of personalized medicine, there is a movement to develop “smaller” and “smarter” microdevices that are able to distinguish similar cancer subtypes. Tumor cells display major differences when compared to their natural counterparts, due to alterations in fundamental cellular processes such as glycosylation. Glycans are involved in tumor cell biology and they have been considered to be suitable cancer biomarkers. Thus, more selective cancer screening assays can be developed through the detection of specific altered glycans on the surface of circulating cancer cells. Currently, this is only possible through time-consuming assays. In this work, we propose the “intelligent” Lab on Fiber (iLoF) device, that has a high-resolution, and which is a fast and portable method for tumor single-cell type identification and isolation. We apply an Artificial Intelligence approach to the back-scattered signal arising from a trapped cell by a micro-lensed optical fiber. As a proof of concept, we show that iLoF is able to discriminate two human cancer cell models sharing the same genetic background but displaying a different surface glycosylation profile with an accuracy above 90% and a speed rate of 2.3 seconds. We envision the incorporation of the iLoF in an easy-to-operate microchip for cancer identification, which would allow further biological characterization of the captured circulating live cells.
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spelling pubmed-70353802020-02-28 iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification Paiva, Joana S. Jorge, Pedro A. S. Ribeiro, Rita S. R. Balmaña, Meritxell Campos, Diana Mereiter, Stefan Jin, Chunsheng Karlsson, Niclas G. Sampaio, Paula Reis, Celso A. Cunha, João P. S. Sci Rep Article With the advent of personalized medicine, there is a movement to develop “smaller” and “smarter” microdevices that are able to distinguish similar cancer subtypes. Tumor cells display major differences when compared to their natural counterparts, due to alterations in fundamental cellular processes such as glycosylation. Glycans are involved in tumor cell biology and they have been considered to be suitable cancer biomarkers. Thus, more selective cancer screening assays can be developed through the detection of specific altered glycans on the surface of circulating cancer cells. Currently, this is only possible through time-consuming assays. In this work, we propose the “intelligent” Lab on Fiber (iLoF) device, that has a high-resolution, and which is a fast and portable method for tumor single-cell type identification and isolation. We apply an Artificial Intelligence approach to the back-scattered signal arising from a trapped cell by a micro-lensed optical fiber. As a proof of concept, we show that iLoF is able to discriminate two human cancer cell models sharing the same genetic background but displaying a different surface glycosylation profile with an accuracy above 90% and a speed rate of 2.3 seconds. We envision the incorporation of the iLoF in an easy-to-operate microchip for cancer identification, which would allow further biological characterization of the captured circulating live cells. Nature Publishing Group UK 2020-02-21 /pmc/articles/PMC7035380/ /pubmed/32081911 http://dx.doi.org/10.1038/s41598-020-59661-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Paiva, Joana S.
Jorge, Pedro A. S.
Ribeiro, Rita S. R.
Balmaña, Meritxell
Campos, Diana
Mereiter, Stefan
Jin, Chunsheng
Karlsson, Niclas G.
Sampaio, Paula
Reis, Celso A.
Cunha, João P. S.
iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification
title iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification
title_full iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification
title_fullStr iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification
title_full_unstemmed iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification
title_short iLoF: An intelligent Lab on Fiber Approach for Human Cancer Single-Cell Type Identification
title_sort ilof: an intelligent lab on fiber approach for human cancer single-cell type identification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7035380/
https://www.ncbi.nlm.nih.gov/pubmed/32081911
http://dx.doi.org/10.1038/s41598-020-59661-5
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