Cargando…
Packing structure of semiflexible rings
Unraveling the packing structure of dense assemblies of semiflexible rings is not only fundamental for the dynamical description of polymer rings, but also key to understand biopackaging, such as observed in circular DNA of viruses or genome folding. Here we use X-ray tomography to study the geometr...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7035624/ https://www.ncbi.nlm.nih.gov/pubmed/32024763 http://dx.doi.org/10.1073/pnas.1914268117 |
_version_ | 1783500091442593792 |
---|---|
author | Gómez, Leopoldo R. García, Nicolás A. Pöschel, Thorsten |
author_facet | Gómez, Leopoldo R. García, Nicolás A. Pöschel, Thorsten |
author_sort | Gómez, Leopoldo R. |
collection | PubMed |
description | Unraveling the packing structure of dense assemblies of semiflexible rings is not only fundamental for the dynamical description of polymer rings, but also key to understand biopackaging, such as observed in circular DNA of viruses or genome folding. Here we use X-ray tomography to study the geometrical and topological features of disordered packings of rubber bands in a cylindrical container. Assemblies of short bands assume a liquid-like disordered structure, with short-range orientational order, and reveal only minor influence of the container. In the case of longer bands, the confinement causes folded configurations and the bands interpenetrate and entangle. Most of the systems are found to display a threading network which percolates the system. Surprisingly, for long bands whose diameter is more than twice the diameter of the container, we found that all bands interpenetrate each other, in a complex fully entangled structure. |
format | Online Article Text |
id | pubmed-7035624 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-70356242020-02-28 Packing structure of semiflexible rings Gómez, Leopoldo R. García, Nicolás A. Pöschel, Thorsten Proc Natl Acad Sci U S A Physical Sciences Unraveling the packing structure of dense assemblies of semiflexible rings is not only fundamental for the dynamical description of polymer rings, but also key to understand biopackaging, such as observed in circular DNA of viruses or genome folding. Here we use X-ray tomography to study the geometrical and topological features of disordered packings of rubber bands in a cylindrical container. Assemblies of short bands assume a liquid-like disordered structure, with short-range orientational order, and reveal only minor influence of the container. In the case of longer bands, the confinement causes folded configurations and the bands interpenetrate and entangle. Most of the systems are found to display a threading network which percolates the system. Surprisingly, for long bands whose diameter is more than twice the diameter of the container, we found that all bands interpenetrate each other, in a complex fully entangled structure. National Academy of Sciences 2020-02-18 2020-02-05 /pmc/articles/PMC7035624/ /pubmed/32024763 http://dx.doi.org/10.1073/pnas.1914268117 Text en Copyright © 2020 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Physical Sciences Gómez, Leopoldo R. García, Nicolás A. Pöschel, Thorsten Packing structure of semiflexible rings |
title | Packing structure of semiflexible rings |
title_full | Packing structure of semiflexible rings |
title_fullStr | Packing structure of semiflexible rings |
title_full_unstemmed | Packing structure of semiflexible rings |
title_short | Packing structure of semiflexible rings |
title_sort | packing structure of semiflexible rings |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7035624/ https://www.ncbi.nlm.nih.gov/pubmed/32024763 http://dx.doi.org/10.1073/pnas.1914268117 |
work_keys_str_mv | AT gomezleopoldor packingstructureofsemiflexiblerings AT garcianicolasa packingstructureofsemiflexiblerings AT poschelthorsten packingstructureofsemiflexiblerings |