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Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma
BACKGROUND: Pyruvate kinase M2 (PKM2) is critical regulator contributing to Warburg effect. However, the expression pattern and prognostic value of PKM2 remain unknown in lung adenocarcinoma (LUAD). The aim of this study is to clarify the prognostic value of PKM2 via intergrated bioinformatics analy...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7036274/ https://www.ncbi.nlm.nih.gov/pubmed/32117639 http://dx.doi.org/10.7717/peerj.8625 |
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author | Wang, Guiping Zhong, Yingying Liang, Jiecong Li, Zhibin Ye, Yun |
author_facet | Wang, Guiping Zhong, Yingying Liang, Jiecong Li, Zhibin Ye, Yun |
author_sort | Wang, Guiping |
collection | PubMed |
description | BACKGROUND: Pyruvate kinase M2 (PKM2) is critical regulator contributing to Warburg effect. However, the expression pattern and prognostic value of PKM2 remain unknown in lung adenocarcinoma (LUAD). The aim of this study is to clarify the prognostic value of PKM2 via intergrated bioinformatics analysis. METHODS: Firstly, mRNA expression levels of PKM2 in LUAD were systematically analyzed using the ONCOMINE and TCGA databases. Then, the association between PKM2 expression and clinical parameters was investigated by UALCAN. The Kaplan–Meier Plotter was used to assess the prognostic significance of PKM2. Finally, the relationship between PKM2 expression and its genetic and epigenetic changes was evaluated with MEXPRESS and MethHC database. RESULTS: Pooled analysis showed that PKM2 is frequently upregulated expression in LUAD. Subsequently, PKM2 expression was identified to be positively associated with tumor stage and lymph node metastasis and also strongly correlated with worse OS (P = 2.80e−14), PPS (P = 0.022), FP (P = 1.30e−6) and RFS (P = 3.41e−8). Importantly, our results demonstrated that over-expressed PKM2 is associated with PKM2 hypomethylation and copy number variations (CNVs). CONCLUSION: This study confirms that over-expressed PKM2 in LUAD is associated with poor prognosis, suggesting that PKM2 might act as a promising prognostic biomarker and novel therapeutic target for LUAD. |
format | Online Article Text |
id | pubmed-7036274 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70362742020-02-28 Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma Wang, Guiping Zhong, Yingying Liang, Jiecong Li, Zhibin Ye, Yun PeerJ Bioinformatics BACKGROUND: Pyruvate kinase M2 (PKM2) is critical regulator contributing to Warburg effect. However, the expression pattern and prognostic value of PKM2 remain unknown in lung adenocarcinoma (LUAD). The aim of this study is to clarify the prognostic value of PKM2 via intergrated bioinformatics analysis. METHODS: Firstly, mRNA expression levels of PKM2 in LUAD were systematically analyzed using the ONCOMINE and TCGA databases. Then, the association between PKM2 expression and clinical parameters was investigated by UALCAN. The Kaplan–Meier Plotter was used to assess the prognostic significance of PKM2. Finally, the relationship between PKM2 expression and its genetic and epigenetic changes was evaluated with MEXPRESS and MethHC database. RESULTS: Pooled analysis showed that PKM2 is frequently upregulated expression in LUAD. Subsequently, PKM2 expression was identified to be positively associated with tumor stage and lymph node metastasis and also strongly correlated with worse OS (P = 2.80e−14), PPS (P = 0.022), FP (P = 1.30e−6) and RFS (P = 3.41e−8). Importantly, our results demonstrated that over-expressed PKM2 is associated with PKM2 hypomethylation and copy number variations (CNVs). CONCLUSION: This study confirms that over-expressed PKM2 in LUAD is associated with poor prognosis, suggesting that PKM2 might act as a promising prognostic biomarker and novel therapeutic target for LUAD. PeerJ Inc. 2020-02-20 /pmc/articles/PMC7036274/ /pubmed/32117639 http://dx.doi.org/10.7717/peerj.8625 Text en © 2020 Wang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Wang, Guiping Zhong, Yingying Liang, Jiecong Li, Zhibin Ye, Yun Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma |
title | Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma |
title_full | Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma |
title_fullStr | Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma |
title_full_unstemmed | Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma |
title_short | Upregulated expression of pyruvate kinase M2 mRNA predicts poor prognosis in lung adenocarcinoma |
title_sort | upregulated expression of pyruvate kinase m2 mrna predicts poor prognosis in lung adenocarcinoma |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7036274/ https://www.ncbi.nlm.nih.gov/pubmed/32117639 http://dx.doi.org/10.7717/peerj.8625 |
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