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NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus

Nipah virus (NiV) is an emerging and priority pathogen from the Paramyxoviridae family with a high fatality rate. It causes various diseases such as respiratory ailments and encephalitis and poses a great threat to humans and livestock. Despite various efforts, there is no approved antiviral treatme...

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Autores principales: Gupta, Amit Kumar, Kumar, Archit, Rajput, Akanksha, Kaur, Karambir, Dar, Showkat Ahmed, Thakur, Anamika, Megha, Kirti, Kumar, Manoj
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7036594/
https://www.ncbi.nlm.nih.gov/pubmed/32090261
http://dx.doi.org/10.1093/database/baz159
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author Gupta, Amit Kumar
Kumar, Archit
Rajput, Akanksha
Kaur, Karambir
Dar, Showkat Ahmed
Thakur, Anamika
Megha, Kirti
Kumar, Manoj
author_facet Gupta, Amit Kumar
Kumar, Archit
Rajput, Akanksha
Kaur, Karambir
Dar, Showkat Ahmed
Thakur, Anamika
Megha, Kirti
Kumar, Manoj
author_sort Gupta, Amit Kumar
collection PubMed
description Nipah virus (NiV) is an emerging and priority pathogen from the Paramyxoviridae family with a high fatality rate. It causes various diseases such as respiratory ailments and encephalitis and poses a great threat to humans and livestock. Despite various efforts, there is no approved antiviral treatment available. Therefore, to expedite and assist the research, we have developed an integrative resource NipahVR (http://bioinfo.imtech.res.in/manojk/nipahvr/) for the multi-targeted putative therapeutics and epitopes for NiV. It is structured into different sections, i.e. genomes, codon usage, phylogenomics, molecular diagnostic primers, therapeutics (siRNAs, sgRNAs, miRNAs) and vaccine epitopes (B-cell, CTL, MHC-I and -II binders). Most decisively, potentially efficient therapeutic regimens targeting different NiV proteins and genes were anticipated and projected. We hope this computational resource would be helpful in developing combating strategies against this deadly pathogen. Database URL: http://bioinfo.imtech.res.in/manojk/nipahvr/
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spelling pubmed-70365942020-03-02 NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus Gupta, Amit Kumar Kumar, Archit Rajput, Akanksha Kaur, Karambir Dar, Showkat Ahmed Thakur, Anamika Megha, Kirti Kumar, Manoj Database (Oxford) Original Article Nipah virus (NiV) is an emerging and priority pathogen from the Paramyxoviridae family with a high fatality rate. It causes various diseases such as respiratory ailments and encephalitis and poses a great threat to humans and livestock. Despite various efforts, there is no approved antiviral treatment available. Therefore, to expedite and assist the research, we have developed an integrative resource NipahVR (http://bioinfo.imtech.res.in/manojk/nipahvr/) for the multi-targeted putative therapeutics and epitopes for NiV. It is structured into different sections, i.e. genomes, codon usage, phylogenomics, molecular diagnostic primers, therapeutics (siRNAs, sgRNAs, miRNAs) and vaccine epitopes (B-cell, CTL, MHC-I and -II binders). Most decisively, potentially efficient therapeutic regimens targeting different NiV proteins and genes were anticipated and projected. We hope this computational resource would be helpful in developing combating strategies against this deadly pathogen. Database URL: http://bioinfo.imtech.res.in/manojk/nipahvr/ Oxford University Press 2020-02-24 /pmc/articles/PMC7036594/ /pubmed/32090261 http://dx.doi.org/10.1093/database/baz159 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Gupta, Amit Kumar
Kumar, Archit
Rajput, Akanksha
Kaur, Karambir
Dar, Showkat Ahmed
Thakur, Anamika
Megha, Kirti
Kumar, Manoj
NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
title NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
title_full NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
title_fullStr NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
title_full_unstemmed NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
title_short NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
title_sort nipahvr: a resource of multi-targeted putative therapeutics and epitopes for the nipah virus
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7036594/
https://www.ncbi.nlm.nih.gov/pubmed/32090261
http://dx.doi.org/10.1093/database/baz159
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