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A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis

An exoglucanase (Exg-D) from the glycoside hydrolase family 5 subfamily 38 (GH5_38) was heterologously expressed and structurally and biochemically characterised at a molecular level for its application in alkyl glycoside synthesis. The purified Exg-D existed in both dimeric and monomeric forms in s...

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Autores principales: Mafa, Mpho S., Dirr, Heinrich W., Malgas, Samkelo, Krause, Rui W. M., Rashamuse, Konanani, Pletschke, Brett I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7036808/
https://www.ncbi.nlm.nih.gov/pubmed/32050450
http://dx.doi.org/10.3390/molecules25030746
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author Mafa, Mpho S.
Dirr, Heinrich W.
Malgas, Samkelo
Krause, Rui W. M.
Rashamuse, Konanani
Pletschke, Brett I.
author_facet Mafa, Mpho S.
Dirr, Heinrich W.
Malgas, Samkelo
Krause, Rui W. M.
Rashamuse, Konanani
Pletschke, Brett I.
author_sort Mafa, Mpho S.
collection PubMed
description An exoglucanase (Exg-D) from the glycoside hydrolase family 5 subfamily 38 (GH5_38) was heterologously expressed and structurally and biochemically characterised at a molecular level for its application in alkyl glycoside synthesis. The purified Exg-D existed in both dimeric and monomeric forms in solution, which showed highest activity on mixed-linked β-glucan (88.0 and 86.7 U/mg protein, respectively) and lichenin (24.5 and 23.7 U/mg protein, respectively). They displayed a broad optimum pH range from 5.5 to 7 and a temperature optimum from 40 to 60 °C. Kinetic studies demonstrated that Exg-D had a higher affinity towards β-glucan, with a K(m) of 7.9 mg/mL and a k(cat) of 117.2 s(−1), compared to lichenin which had a K(m) of 21.5 mg/mL and a k(cat) of 70.0 s(−1). The circular dichroism profile of Exg-D showed that its secondary structure consisted of 11% α-helices, 36% β-strands and 53% coils. Exg-D performed transglycosylation using p-nitrophenyl cellobioside as a glycosyl donor and several primary alcohols as acceptors to produce methyl-, ethyl- and propyl-cellobiosides. These products were identified and quantified via thin-layer chromatography (TLC) and liquid chromatography–mass spectrometry (LC-MS). We concluded that Exg-D is a novel and promising oligomeric glycoside hydrolase for the one-step synthesis of alkyl glycosides with more than one monosaccharide unit.
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spelling pubmed-70368082020-03-11 A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis Mafa, Mpho S. Dirr, Heinrich W. Malgas, Samkelo Krause, Rui W. M. Rashamuse, Konanani Pletschke, Brett I. Molecules Article An exoglucanase (Exg-D) from the glycoside hydrolase family 5 subfamily 38 (GH5_38) was heterologously expressed and structurally and biochemically characterised at a molecular level for its application in alkyl glycoside synthesis. The purified Exg-D existed in both dimeric and monomeric forms in solution, which showed highest activity on mixed-linked β-glucan (88.0 and 86.7 U/mg protein, respectively) and lichenin (24.5 and 23.7 U/mg protein, respectively). They displayed a broad optimum pH range from 5.5 to 7 and a temperature optimum from 40 to 60 °C. Kinetic studies demonstrated that Exg-D had a higher affinity towards β-glucan, with a K(m) of 7.9 mg/mL and a k(cat) of 117.2 s(−1), compared to lichenin which had a K(m) of 21.5 mg/mL and a k(cat) of 70.0 s(−1). The circular dichroism profile of Exg-D showed that its secondary structure consisted of 11% α-helices, 36% β-strands and 53% coils. Exg-D performed transglycosylation using p-nitrophenyl cellobioside as a glycosyl donor and several primary alcohols as acceptors to produce methyl-, ethyl- and propyl-cellobiosides. These products were identified and quantified via thin-layer chromatography (TLC) and liquid chromatography–mass spectrometry (LC-MS). We concluded that Exg-D is a novel and promising oligomeric glycoside hydrolase for the one-step synthesis of alkyl glycosides with more than one monosaccharide unit. MDPI 2020-02-09 /pmc/articles/PMC7036808/ /pubmed/32050450 http://dx.doi.org/10.3390/molecules25030746 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mafa, Mpho S.
Dirr, Heinrich W.
Malgas, Samkelo
Krause, Rui W. M.
Rashamuse, Konanani
Pletschke, Brett I.
A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
title A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
title_full A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
title_fullStr A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
title_full_unstemmed A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
title_short A Novel Dimeric Exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
title_sort novel dimeric exoglucanase (gh5_38): biochemical and structural characterisation towards its application in alkyl cellobioside synthesis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7036808/
https://www.ncbi.nlm.nih.gov/pubmed/32050450
http://dx.doi.org/10.3390/molecules25030746
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