Cargando…

Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis

During the last decades, high-throughput assessment of gene expression in patient tissues using microarray technology or RNA-Seq took center stage in clinical research. Insights into the diversity and frequency of transcripts in healthy and diseased conditions provide valuable information on the cel...

Descripción completa

Detalles Bibliográficos
Autores principales: Schwingen, Julius, Kaplan, Mustafa, Kurschus, Florian C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7037913/
https://www.ncbi.nlm.nih.gov/pubmed/31973112
http://dx.doi.org/10.3390/ijms21030699
_version_ 1783500532901478400
author Schwingen, Julius
Kaplan, Mustafa
Kurschus, Florian C.
author_facet Schwingen, Julius
Kaplan, Mustafa
Kurschus, Florian C.
author_sort Schwingen, Julius
collection PubMed
description During the last decades, high-throughput assessment of gene expression in patient tissues using microarray technology or RNA-Seq took center stage in clinical research. Insights into the diversity and frequency of transcripts in healthy and diseased conditions provide valuable information on the cellular status in the respective tissues. Growing with the technique, the bioinformatic analysis toolkit reveals biologically relevant pathways which assist in understanding basic pathophysiological mechanisms. Conventional classification systems of inflammatory skin diseases rely on descriptive assessments by pathologists. In contrast to this, molecular profiling may uncover previously unknown disease classifying features. Thereby, treatments and prognostics of patients may be improved. Furthermore, disease models in basic research in comparison to the human disease can be directly validated. The aim of this article is not only to provide the reader with information on the opportunities of these techniques, but to outline potential pitfalls and technical limitations as well. Major published findings are briefly discussed to provide a broad overview on the current findings in transcriptomics in inflammatory skin diseases.
format Online
Article
Text
id pubmed-7037913
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-70379132020-03-10 Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis Schwingen, Julius Kaplan, Mustafa Kurschus, Florian C. Int J Mol Sci Review During the last decades, high-throughput assessment of gene expression in patient tissues using microarray technology or RNA-Seq took center stage in clinical research. Insights into the diversity and frequency of transcripts in healthy and diseased conditions provide valuable information on the cellular status in the respective tissues. Growing with the technique, the bioinformatic analysis toolkit reveals biologically relevant pathways which assist in understanding basic pathophysiological mechanisms. Conventional classification systems of inflammatory skin diseases rely on descriptive assessments by pathologists. In contrast to this, molecular profiling may uncover previously unknown disease classifying features. Thereby, treatments and prognostics of patients may be improved. Furthermore, disease models in basic research in comparison to the human disease can be directly validated. The aim of this article is not only to provide the reader with information on the opportunities of these techniques, but to outline potential pitfalls and technical limitations as well. Major published findings are briefly discussed to provide a broad overview on the current findings in transcriptomics in inflammatory skin diseases. MDPI 2020-01-21 /pmc/articles/PMC7037913/ /pubmed/31973112 http://dx.doi.org/10.3390/ijms21030699 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Schwingen, Julius
Kaplan, Mustafa
Kurschus, Florian C.
Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis
title Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis
title_full Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis
title_fullStr Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis
title_full_unstemmed Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis
title_short Review—Current Concepts in Inflammatory Skin Diseases Evolved by Transcriptome Analysis: In-Depth Analysis of Atopic Dermatitis and Psoriasis
title_sort review—current concepts in inflammatory skin diseases evolved by transcriptome analysis: in-depth analysis of atopic dermatitis and psoriasis
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7037913/
https://www.ncbi.nlm.nih.gov/pubmed/31973112
http://dx.doi.org/10.3390/ijms21030699
work_keys_str_mv AT schwingenjulius reviewcurrentconceptsininflammatoryskindiseasesevolvedbytranscriptomeanalysisindepthanalysisofatopicdermatitisandpsoriasis
AT kaplanmustafa reviewcurrentconceptsininflammatoryskindiseasesevolvedbytranscriptomeanalysisindepthanalysisofatopicdermatitisandpsoriasis
AT kurschusflorianc reviewcurrentconceptsininflammatoryskindiseasesevolvedbytranscriptomeanalysisindepthanalysisofatopicdermatitisandpsoriasis