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Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis
OBJECTIVE(S): lupus nephritis (LN) is a severe form of systemic lupus erythematosus (SLE) with renal complications. Current diagnosis is based on invasive renal biopsy and serum antibodies and complement levels that are not specific enough. The current study aims to identify new biomarker candidates...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mashhad University of Medical Sciences
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7038420/ https://www.ncbi.nlm.nih.gov/pubmed/32128093 http://dx.doi.org/10.22038/ijbms.2019.38713.9178 |
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author | Kalantari, Shiva Chashmniam, Saeed Nafar, Mohsen Zakeri, Zahra Parvin, Mahmoud |
author_facet | Kalantari, Shiva Chashmniam, Saeed Nafar, Mohsen Zakeri, Zahra Parvin, Mahmoud |
author_sort | Kalantari, Shiva |
collection | PubMed |
description | OBJECTIVE(S): lupus nephritis (LN) is a severe form of systemic lupus erythematosus (SLE) with renal complications. Current diagnosis is based on invasive renal biopsy and serum antibodies and complement levels that are not specific enough. The current study aims to identify new biomarker candidates for non-invasive diagnosis of LN and explore the pathogenic mechanisms that contribute to renal injury. MATERIALS AND METHODS: A metabolomics approach using 1H-nuclear magnetic resonance (1H-NMR), was developed for comparison of urine metabolic profile of 14 LN patients, 10 SLE patients, and 11 healthy controls (HCs). Differential biomarker candidates were identified by using multivariate modeling, and their diagnostic accuracy was evaluated by receiver operating characteristic analysis (ROC). RESULTS: Three metabolites were common in differentiating all three groups including beta-alanine, 2,2-dimethylsucssinic acid, and 3,4-Dihydroxyphenylacetaldehyde and suggested as a diagnostic panel for LN with AUC of 0.89, sensitivity of 81 %, and specificity of 100 %. Complementary analyses on pathways indicated that nicotinate and nicotinamide metabolism is the most important perturbed pathway in LN. CONCLUSION: Metabolomics is a useful tool for identification of biomarkers with the ability to diagnose LN patients and predict perturbed pathways responsible for renal injury. |
format | Online Article Text |
id | pubmed-7038420 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Mashhad University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-70384202020-03-03 Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis Kalantari, Shiva Chashmniam, Saeed Nafar, Mohsen Zakeri, Zahra Parvin, Mahmoud Iran J Basic Med Sci Original Article OBJECTIVE(S): lupus nephritis (LN) is a severe form of systemic lupus erythematosus (SLE) with renal complications. Current diagnosis is based on invasive renal biopsy and serum antibodies and complement levels that are not specific enough. The current study aims to identify new biomarker candidates for non-invasive diagnosis of LN and explore the pathogenic mechanisms that contribute to renal injury. MATERIALS AND METHODS: A metabolomics approach using 1H-nuclear magnetic resonance (1H-NMR), was developed for comparison of urine metabolic profile of 14 LN patients, 10 SLE patients, and 11 healthy controls (HCs). Differential biomarker candidates were identified by using multivariate modeling, and their diagnostic accuracy was evaluated by receiver operating characteristic analysis (ROC). RESULTS: Three metabolites were common in differentiating all three groups including beta-alanine, 2,2-dimethylsucssinic acid, and 3,4-Dihydroxyphenylacetaldehyde and suggested as a diagnostic panel for LN with AUC of 0.89, sensitivity of 81 %, and specificity of 100 %. Complementary analyses on pathways indicated that nicotinate and nicotinamide metabolism is the most important perturbed pathway in LN. CONCLUSION: Metabolomics is a useful tool for identification of biomarkers with the ability to diagnose LN patients and predict perturbed pathways responsible for renal injury. Mashhad University of Medical Sciences 2019-11 /pmc/articles/PMC7038420/ /pubmed/32128093 http://dx.doi.org/10.22038/ijbms.2019.38713.9178 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Kalantari, Shiva Chashmniam, Saeed Nafar, Mohsen Zakeri, Zahra Parvin, Mahmoud Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
title | Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
title_full | Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
title_fullStr | Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
title_full_unstemmed | Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
title_short | Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
title_sort | metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7038420/ https://www.ncbi.nlm.nih.gov/pubmed/32128093 http://dx.doi.org/10.22038/ijbms.2019.38713.9178 |
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