Cargando…
16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation
OBJECTIVES: The silkworm Bombyx mori (B. mori) is an important domesticated lepidopteran model for basic and applied research. They produce silk fibres that have great economic value. The gut microbiome plays an important role in the growth of organisms. Spermidine (Spd) is shown to be important for...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7038597/ https://www.ncbi.nlm.nih.gov/pubmed/32093782 http://dx.doi.org/10.1186/s13104-020-04958-x |
_version_ | 1783500675493134336 |
---|---|
author | Rajan, Resma Chunduri, Alekhya Rani Lima, Anugata Mamillapalli, Anitha |
author_facet | Rajan, Resma Chunduri, Alekhya Rani Lima, Anugata Mamillapalli, Anitha |
author_sort | Rajan, Resma |
collection | PubMed |
description | OBJECTIVES: The silkworm Bombyx mori (B. mori) is an important domesticated lepidopteran model for basic and applied research. They produce silk fibres that have great economic value. The gut microbiome plays an important role in the growth of organisms. Spermidine (Spd) is shown to be important for the growth of all living cells. The effect of spermidine feeding on the gut microbiome of 5th instar B. mori larvae was checked. The B. mori gut samples from control and spermidine fed larvae were subjected to next-generation sequencing analysis to unravel changes in the bacterial community upon spermidine supplementation. DATA DESCRIPTION: The changes in gut bacteriota after spermidine feeding is not studied before. B. mori larvae were divided into two groups of 50 worms each and were fed with normal mulberry leaves and mulberry leaves fortified with 50 µM spermidine. The gut tissues were isolated aseptically and total genomic DNA was extracted, 16S rRNA region amplified and sequenced using Illumina platform. The spermidine fed gut samples were shown to have abundance and diversity of the phyla Proteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria. |
format | Online Article Text |
id | pubmed-7038597 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-70385972020-03-02 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation Rajan, Resma Chunduri, Alekhya Rani Lima, Anugata Mamillapalli, Anitha BMC Res Notes Data Note OBJECTIVES: The silkworm Bombyx mori (B. mori) is an important domesticated lepidopteran model for basic and applied research. They produce silk fibres that have great economic value. The gut microbiome plays an important role in the growth of organisms. Spermidine (Spd) is shown to be important for the growth of all living cells. The effect of spermidine feeding on the gut microbiome of 5th instar B. mori larvae was checked. The B. mori gut samples from control and spermidine fed larvae were subjected to next-generation sequencing analysis to unravel changes in the bacterial community upon spermidine supplementation. DATA DESCRIPTION: The changes in gut bacteriota after spermidine feeding is not studied before. B. mori larvae were divided into two groups of 50 worms each and were fed with normal mulberry leaves and mulberry leaves fortified with 50 µM spermidine. The gut tissues were isolated aseptically and total genomic DNA was extracted, 16S rRNA region amplified and sequenced using Illumina platform. The spermidine fed gut samples were shown to have abundance and diversity of the phyla Proteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria. BioMed Central 2020-02-24 /pmc/articles/PMC7038597/ /pubmed/32093782 http://dx.doi.org/10.1186/s13104-020-04958-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Data Note Rajan, Resma Chunduri, Alekhya Rani Lima, Anugata Mamillapalli, Anitha 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation |
title | 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation |
title_full | 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation |
title_fullStr | 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation |
title_full_unstemmed | 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation |
title_short | 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation |
title_sort | 16s rrna sequence data of bombyx mori gut bacteriome after spermidine supplementation |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7038597/ https://www.ncbi.nlm.nih.gov/pubmed/32093782 http://dx.doi.org/10.1186/s13104-020-04958-x |
work_keys_str_mv | AT rajanresma 16srrnasequencedataofbombyxmorigutbacteriomeafterspermidinesupplementation AT chundurialekhyarani 16srrnasequencedataofbombyxmorigutbacteriomeafterspermidinesupplementation AT limaanugata 16srrnasequencedataofbombyxmorigutbacteriomeafterspermidinesupplementation AT mamillapallianitha 16srrnasequencedataofbombyxmorigutbacteriomeafterspermidinesupplementation |