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Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins

H-NS proteins act as osmotic sensors translating changes in osmolarity into altered DNA binding properties, thus, regulating enterobacterial genome organization and genes transcription. The molecular mechanism underlying the switching process and its conservation among H-NS family members remains el...

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Autores principales: Qin, Liang, Bdira, Fredj Ben, Sterckx, Yann G J, Volkov, Alexander N, Vreede, Jocelyne, Giachin, Gabriele, van Schaik, Peter, Ubbink, Marcellus, Dame, Remus T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7039000/
https://www.ncbi.nlm.nih.gov/pubmed/31925429
http://dx.doi.org/10.1093/nar/gkz1226
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author Qin, Liang
Bdira, Fredj Ben
Sterckx, Yann G J
Volkov, Alexander N
Vreede, Jocelyne
Giachin, Gabriele
van Schaik, Peter
Ubbink, Marcellus
Dame, Remus T
author_facet Qin, Liang
Bdira, Fredj Ben
Sterckx, Yann G J
Volkov, Alexander N
Vreede, Jocelyne
Giachin, Gabriele
van Schaik, Peter
Ubbink, Marcellus
Dame, Remus T
author_sort Qin, Liang
collection PubMed
description H-NS proteins act as osmotic sensors translating changes in osmolarity into altered DNA binding properties, thus, regulating enterobacterial genome organization and genes transcription. The molecular mechanism underlying the switching process and its conservation among H-NS family members remains elusive. Here, we focus on the H-NS family protein MvaT from Pseudomonas aeruginosa and demonstrate experimentally that its protomer exists in two different conformations, corresponding to two different functional states. In the half-opened state (dominant at low salt) the protein forms filaments along DNA, in the fully opened state (dominant at high salt) the protein bridges DNA. This switching is a direct effect of ionic strength on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of MvaT. The asymmetric charge distribution and intramolecular interactions are conserved among the H-NS family of proteins. Therefore, our study establishes a general paradigm for the molecular mechanistic basis of the osmosensitivity of H-NS proteins.
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spelling pubmed-70390002020-03-02 Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins Qin, Liang Bdira, Fredj Ben Sterckx, Yann G J Volkov, Alexander N Vreede, Jocelyne Giachin, Gabriele van Schaik, Peter Ubbink, Marcellus Dame, Remus T Nucleic Acids Res Structural Biology H-NS proteins act as osmotic sensors translating changes in osmolarity into altered DNA binding properties, thus, regulating enterobacterial genome organization and genes transcription. The molecular mechanism underlying the switching process and its conservation among H-NS family members remains elusive. Here, we focus on the H-NS family protein MvaT from Pseudomonas aeruginosa and demonstrate experimentally that its protomer exists in two different conformations, corresponding to two different functional states. In the half-opened state (dominant at low salt) the protein forms filaments along DNA, in the fully opened state (dominant at high salt) the protein bridges DNA. This switching is a direct effect of ionic strength on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of MvaT. The asymmetric charge distribution and intramolecular interactions are conserved among the H-NS family of proteins. Therefore, our study establishes a general paradigm for the molecular mechanistic basis of the osmosensitivity of H-NS proteins. Oxford University Press 2020-02-28 2020-01-11 /pmc/articles/PMC7039000/ /pubmed/31925429 http://dx.doi.org/10.1093/nar/gkz1226 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Structural Biology
Qin, Liang
Bdira, Fredj Ben
Sterckx, Yann G J
Volkov, Alexander N
Vreede, Jocelyne
Giachin, Gabriele
van Schaik, Peter
Ubbink, Marcellus
Dame, Remus T
Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
title Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
title_full Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
title_fullStr Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
title_full_unstemmed Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
title_short Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
title_sort structural basis for osmotic regulation of the dna binding properties of h-ns proteins
topic Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7039000/
https://www.ncbi.nlm.nih.gov/pubmed/31925429
http://dx.doi.org/10.1093/nar/gkz1226
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