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Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients
The present study focused on the expression patterns, prognostic values and potential mechanism of the PDI family in gliomas. Most PDI family members’ mRNA expressions were observed significantly different between gliomas classified by clinical features. Construction of the PDI signature, cluster an...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041756/ https://www.ncbi.nlm.nih.gov/pubmed/32023222 http://dx.doi.org/10.18632/aging.102748 |
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author | Peng, Zhigang Chen, Yu Cao, Hui Zou, Hecun Wan, Xin Zeng, Wenjing Liu, Yanling Hu, Jiaqing Zhang, Nan Xia, Zhiwei Liu, Zhixiong Cheng, Quan |
author_facet | Peng, Zhigang Chen, Yu Cao, Hui Zou, Hecun Wan, Xin Zeng, Wenjing Liu, Yanling Hu, Jiaqing Zhang, Nan Xia, Zhiwei Liu, Zhixiong Cheng, Quan |
author_sort | Peng, Zhigang |
collection | PubMed |
description | The present study focused on the expression patterns, prognostic values and potential mechanism of the PDI family in gliomas. Most PDI family members’ mRNA expressions were observed significantly different between gliomas classified by clinical features. Construction of the PDI signature, cluster and risk score models of glioma was done using GSVA, consensus clustering analysis, and LASSO Cox regression analysis respectively. High values of PDI signature/ risk score and cluster 1 in gliomas were associated with malignant clinicopathological characteristics and poor prognosis. Analysis of the distinctive genomic alterations in gliomas revealed that many cases having high PDI signature and risk score were associated with genomic aberrations of driver oncogenes. GSVA analysis showed that PDI family was involved in many signaling pathways in ERAD, apoptosis, and MHC class I among many more. Prognostic nomogram revealed that the risk score was a good prognosis indicator for gliomas. The qRT-PCR and immunohistochemistry confirmed that P4HB, PDIA4 and PDIA5 were overexpressed in gliomas. In summary, this research highlighted the clinical importance of PDI family in tumorigenesis and progression in gliomas. |
format | Online Article Text |
id | pubmed-7041756 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-70417562020-03-04 Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients Peng, Zhigang Chen, Yu Cao, Hui Zou, Hecun Wan, Xin Zeng, Wenjing Liu, Yanling Hu, Jiaqing Zhang, Nan Xia, Zhiwei Liu, Zhixiong Cheng, Quan Aging (Albany NY) Research Paper The present study focused on the expression patterns, prognostic values and potential mechanism of the PDI family in gliomas. Most PDI family members’ mRNA expressions were observed significantly different between gliomas classified by clinical features. Construction of the PDI signature, cluster and risk score models of glioma was done using GSVA, consensus clustering analysis, and LASSO Cox regression analysis respectively. High values of PDI signature/ risk score and cluster 1 in gliomas were associated with malignant clinicopathological characteristics and poor prognosis. Analysis of the distinctive genomic alterations in gliomas revealed that many cases having high PDI signature and risk score were associated with genomic aberrations of driver oncogenes. GSVA analysis showed that PDI family was involved in many signaling pathways in ERAD, apoptosis, and MHC class I among many more. Prognostic nomogram revealed that the risk score was a good prognosis indicator for gliomas. The qRT-PCR and immunohistochemistry confirmed that P4HB, PDIA4 and PDIA5 were overexpressed in gliomas. In summary, this research highlighted the clinical importance of PDI family in tumorigenesis and progression in gliomas. Impact Journals 2020-02-05 /pmc/articles/PMC7041756/ /pubmed/32023222 http://dx.doi.org/10.18632/aging.102748 Text en Copyright © 2020 Peng et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Peng, Zhigang Chen, Yu Cao, Hui Zou, Hecun Wan, Xin Zeng, Wenjing Liu, Yanling Hu, Jiaqing Zhang, Nan Xia, Zhiwei Liu, Zhixiong Cheng, Quan Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
title | Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
title_full | Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
title_fullStr | Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
title_full_unstemmed | Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
title_short | Protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
title_sort | protein disulfide isomerases are promising targets for predicting the survival and tumor progression in glioma patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041756/ https://www.ncbi.nlm.nih.gov/pubmed/32023222 http://dx.doi.org/10.18632/aging.102748 |
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