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EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients

Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third hi...

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Autores principales: Zhu, Gongmin, Pei, Lijiao, Li, Yuan, Gou, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041765/
https://www.ncbi.nlm.nih.gov/pubmed/32012118
http://dx.doi.org/10.18632/aging.102728
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author Zhu, Gongmin
Pei, Lijiao
Li, Yuan
Gou, Xin
author_facet Zhu, Gongmin
Pei, Lijiao
Li, Yuan
Gou, Xin
author_sort Zhu, Gongmin
collection PubMed
description Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third highest mutation rate. However, whether these gene mutations are related to TMB and immune response remain unknown. In this study, we downloaded somatic mutation data of bladder cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found 11 frequently mutated genes were covered by both two cohorts including FGFR3, TTN, XIRP2, CREBBP, PIK3CA, TP53, MUC16, EP300 (E1A binding protein P300), ARID1A, ERBB2, and KDM6A. Among them, EP300 mutation was associated with higher TMB and indicated a favorable clinical prognosis. Furthermore, based on Gene set enrichment analysis (GSEA) and CIBERSORT algorithm, we observed that EP300 mutation upregulated signaling pathways involved in immune system and enhanced antitumor immune response. In conclusion, EP300 is frequently mutated in bladder cancer, and its mutation is associated with increased TMB and promotes antitumor immunity, which may serve as a biomarker to predict immune response.
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spelling pubmed-70417652020-03-04 EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients Zhu, Gongmin Pei, Lijiao Li, Yuan Gou, Xin Aging (Albany NY) Research Paper Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third highest mutation rate. However, whether these gene mutations are related to TMB and immune response remain unknown. In this study, we downloaded somatic mutation data of bladder cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found 11 frequently mutated genes were covered by both two cohorts including FGFR3, TTN, XIRP2, CREBBP, PIK3CA, TP53, MUC16, EP300 (E1A binding protein P300), ARID1A, ERBB2, and KDM6A. Among them, EP300 mutation was associated with higher TMB and indicated a favorable clinical prognosis. Furthermore, based on Gene set enrichment analysis (GSEA) and CIBERSORT algorithm, we observed that EP300 mutation upregulated signaling pathways involved in immune system and enhanced antitumor immune response. In conclusion, EP300 is frequently mutated in bladder cancer, and its mutation is associated with increased TMB and promotes antitumor immunity, which may serve as a biomarker to predict immune response. Impact Journals 2020-02-03 /pmc/articles/PMC7041765/ /pubmed/32012118 http://dx.doi.org/10.18632/aging.102728 Text en Copyright © 2020 Zhu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhu, Gongmin
Pei, Lijiao
Li, Yuan
Gou, Xin
EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
title EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
title_full EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
title_fullStr EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
title_full_unstemmed EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
title_short EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
title_sort ep300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041765/
https://www.ncbi.nlm.nih.gov/pubmed/32012118
http://dx.doi.org/10.18632/aging.102728
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