Cargando…
EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients
Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third hi...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041765/ https://www.ncbi.nlm.nih.gov/pubmed/32012118 http://dx.doi.org/10.18632/aging.102728 |
_version_ | 1783501205376335872 |
---|---|
author | Zhu, Gongmin Pei, Lijiao Li, Yuan Gou, Xin |
author_facet | Zhu, Gongmin Pei, Lijiao Li, Yuan Gou, Xin |
author_sort | Zhu, Gongmin |
collection | PubMed |
description | Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third highest mutation rate. However, whether these gene mutations are related to TMB and immune response remain unknown. In this study, we downloaded somatic mutation data of bladder cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found 11 frequently mutated genes were covered by both two cohorts including FGFR3, TTN, XIRP2, CREBBP, PIK3CA, TP53, MUC16, EP300 (E1A binding protein P300), ARID1A, ERBB2, and KDM6A. Among them, EP300 mutation was associated with higher TMB and indicated a favorable clinical prognosis. Furthermore, based on Gene set enrichment analysis (GSEA) and CIBERSORT algorithm, we observed that EP300 mutation upregulated signaling pathways involved in immune system and enhanced antitumor immune response. In conclusion, EP300 is frequently mutated in bladder cancer, and its mutation is associated with increased TMB and promotes antitumor immunity, which may serve as a biomarker to predict immune response. |
format | Online Article Text |
id | pubmed-7041765 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-70417652020-03-04 EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients Zhu, Gongmin Pei, Lijiao Li, Yuan Gou, Xin Aging (Albany NY) Research Paper Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third highest mutation rate. However, whether these gene mutations are related to TMB and immune response remain unknown. In this study, we downloaded somatic mutation data of bladder cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found 11 frequently mutated genes were covered by both two cohorts including FGFR3, TTN, XIRP2, CREBBP, PIK3CA, TP53, MUC16, EP300 (E1A binding protein P300), ARID1A, ERBB2, and KDM6A. Among them, EP300 mutation was associated with higher TMB and indicated a favorable clinical prognosis. Furthermore, based on Gene set enrichment analysis (GSEA) and CIBERSORT algorithm, we observed that EP300 mutation upregulated signaling pathways involved in immune system and enhanced antitumor immune response. In conclusion, EP300 is frequently mutated in bladder cancer, and its mutation is associated with increased TMB and promotes antitumor immunity, which may serve as a biomarker to predict immune response. Impact Journals 2020-02-03 /pmc/articles/PMC7041765/ /pubmed/32012118 http://dx.doi.org/10.18632/aging.102728 Text en Copyright © 2020 Zhu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhu, Gongmin Pei, Lijiao Li, Yuan Gou, Xin EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
title | EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
title_full | EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
title_fullStr | EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
title_full_unstemmed | EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
title_short | EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
title_sort | ep300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041765/ https://www.ncbi.nlm.nih.gov/pubmed/32012118 http://dx.doi.org/10.18632/aging.102728 |
work_keys_str_mv | AT zhugongmin ep300mutationisassociatedwithtumormutationburdenandpromotesantitumorimmunityinbladdercancerpatients AT peilijiao ep300mutationisassociatedwithtumormutationburdenandpromotesantitumorimmunityinbladdercancerpatients AT liyuan ep300mutationisassociatedwithtumormutationburdenandpromotesantitumorimmunityinbladdercancerpatients AT gouxin ep300mutationisassociatedwithtumormutationburdenandpromotesantitumorimmunityinbladdercancerpatients |