Cargando…

Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone

Lymphatic spread determines treatment decisions in prostate cancer (PCa) patients. 68Ga-PSMA-PET/CT can be performed, although cost remains high and availability is limited. Therefore, computed tomography (CT) continues to be the most used modality for PCa staging. We assessed if convolutional neura...

Descripción completa

Detalles Bibliográficos
Autores principales: Hartenstein, A., Lübbe, F., Baur, A. D. J., Rudolph, M. M., Furth, C., Brenner, W., Amthauer, H., Hamm, B., Makowski, M., Penzkofer, T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7042227/
https://www.ncbi.nlm.nih.gov/pubmed/32099001
http://dx.doi.org/10.1038/s41598-020-60311-z
_version_ 1783501268121026560
author Hartenstein, A.
Lübbe, F.
Baur, A. D. J.
Rudolph, M. M.
Furth, C.
Brenner, W.
Amthauer, H.
Hamm, B.
Makowski, M.
Penzkofer, T.
author_facet Hartenstein, A.
Lübbe, F.
Baur, A. D. J.
Rudolph, M. M.
Furth, C.
Brenner, W.
Amthauer, H.
Hamm, B.
Makowski, M.
Penzkofer, T.
author_sort Hartenstein, A.
collection PubMed
description Lymphatic spread determines treatment decisions in prostate cancer (PCa) patients. 68Ga-PSMA-PET/CT can be performed, although cost remains high and availability is limited. Therefore, computed tomography (CT) continues to be the most used modality for PCa staging. We assessed if convolutional neural networks (CNNs) can be trained to determine 68Ga-PSMA-PET/CT-lymph node status from CT alone. In 549 patients with 68Ga-PSMA PET/CT imaging, 2616 lymph nodes were segmented. Using PET as a reference standard, three CNNs were trained. Training sets balanced for infiltration status, lymph node location and additionally, masked images, were used for training. CNNs were evaluated using a separate test set and performance was compared to radiologists’ assessments and random forest classifiers. Heatmaps maps were used to identify the performance determining image regions. The CNNs performed with an Area-Under-the-Curve of 0.95 (status balanced) and 0.86 (location balanced, masked), compared to an AUC of 0.81 of experienced radiologists. Interestingly, CNNs used anatomical surroundings to increase their performance, “learning” the infiltration probabilities of anatomical locations. In conclusion, CNNs have the potential to build a well performing CT-based biomarker for lymph node metastases in PCa, with different types of class balancing strongly affecting CNN performance.
format Online
Article
Text
id pubmed-7042227
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-70422272020-03-03 Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone Hartenstein, A. Lübbe, F. Baur, A. D. J. Rudolph, M. M. Furth, C. Brenner, W. Amthauer, H. Hamm, B. Makowski, M. Penzkofer, T. Sci Rep Article Lymphatic spread determines treatment decisions in prostate cancer (PCa) patients. 68Ga-PSMA-PET/CT can be performed, although cost remains high and availability is limited. Therefore, computed tomography (CT) continues to be the most used modality for PCa staging. We assessed if convolutional neural networks (CNNs) can be trained to determine 68Ga-PSMA-PET/CT-lymph node status from CT alone. In 549 patients with 68Ga-PSMA PET/CT imaging, 2616 lymph nodes were segmented. Using PET as a reference standard, three CNNs were trained. Training sets balanced for infiltration status, lymph node location and additionally, masked images, were used for training. CNNs were evaluated using a separate test set and performance was compared to radiologists’ assessments and random forest classifiers. Heatmaps maps were used to identify the performance determining image regions. The CNNs performed with an Area-Under-the-Curve of 0.95 (status balanced) and 0.86 (location balanced, masked), compared to an AUC of 0.81 of experienced radiologists. Interestingly, CNNs used anatomical surroundings to increase their performance, “learning” the infiltration probabilities of anatomical locations. In conclusion, CNNs have the potential to build a well performing CT-based biomarker for lymph node metastases in PCa, with different types of class balancing strongly affecting CNN performance. Nature Publishing Group UK 2020-02-25 /pmc/articles/PMC7042227/ /pubmed/32099001 http://dx.doi.org/10.1038/s41598-020-60311-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hartenstein, A.
Lübbe, F.
Baur, A. D. J.
Rudolph, M. M.
Furth, C.
Brenner, W.
Amthauer, H.
Hamm, B.
Makowski, M.
Penzkofer, T.
Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone
title Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone
title_full Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone
title_fullStr Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone
title_full_unstemmed Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone
title_short Prostate Cancer Nodal Staging: Using Deep Learning to Predict (68)Ga-PSMA-Positivity from CT Imaging Alone
title_sort prostate cancer nodal staging: using deep learning to predict (68)ga-psma-positivity from ct imaging alone
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7042227/
https://www.ncbi.nlm.nih.gov/pubmed/32099001
http://dx.doi.org/10.1038/s41598-020-60311-z
work_keys_str_mv AT hartensteina prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT lubbef prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT bauradj prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT rudolphmm prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT furthc prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT brennerw prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT amthauerh prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT hammb prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT makowskim prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone
AT penzkofert prostatecancernodalstagingusingdeeplearningtopredict68gapsmapositivityfromctimagingalone