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Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series

A novel methodology is proposed to robustly map oil seed rape (OSR) flowering phenology from time series generated from the Copernicus Sentinel-1 (S1) and Sentinel-2 (S2) sensors. The time series are averaged at parcel level, initially for a set of 229 reference parcels for which multiple phenologic...

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Autores principales: d’Andrimont, Raphaël, Taymans, Matthieu, Lemoine, Guido, Ceglar, Andrej, Yordanov, Momchil, van der Velde, Marijn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Elsevier Pub. Co 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7043338/
https://www.ncbi.nlm.nih.gov/pubmed/32184531
http://dx.doi.org/10.1016/j.rse.2020.111660
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author d’Andrimont, Raphaël
Taymans, Matthieu
Lemoine, Guido
Ceglar, Andrej
Yordanov, Momchil
van der Velde, Marijn
author_facet d’Andrimont, Raphaël
Taymans, Matthieu
Lemoine, Guido
Ceglar, Andrej
Yordanov, Momchil
van der Velde, Marijn
author_sort d’Andrimont, Raphaël
collection PubMed
description A novel methodology is proposed to robustly map oil seed rape (OSR) flowering phenology from time series generated from the Copernicus Sentinel-1 (S1) and Sentinel-2 (S2) sensors. The time series are averaged at parcel level, initially for a set of 229 reference parcels for which multiple phenological observations on OSR flowering have been collected from April 21 to May 19, 2018. The set of OSR parcels is extended to a regional sample of 32,355 OSR parcels derived from a regional S2 classification. The study area comprises the northern Brandenburg and Mecklenburg-Vorpommern (N) and the southern Bavaria (S) regions in Germany. A method was developed to automatically compute peak flowering at parcel level from the S2 time signature of the Normalized Difference Yellow Index (NDYI) and from the local minimum in S1 VV polarized backscattering coefficients. Peak flowering was determined at a temporal accuracy of 1 to 4 days. A systematic flowering delay of 1 day was observed in the S1 detection compared to S2. Peak flowering differed by 12 days between the N and S. Considerable local variation was observed in the N-S parcel-level flowering gradient. Additional in-situ phenology observations at 70 Deutscher Wetterdienst (DWD) stations confirm the spatial and temporal consistency between S1 and S2 signatures and flowering phenology across both regions. Conditions during flowering strongly determine OSR yield, therefore, the capacity to continuously characterize spatially the timing of key flowering dates across large areas is key. To illustrate this, expected flowering dates were simulated assuming a single OSR variety with a 425 growing degree days (GDD) requirement to reach flowering. This GDD requirement was calculated based on parcel-level peak flowering dates and temperatures accumulated from 25-km gridded meteorological data. The correlation between simulated and S2 observed peak flowering dates still equaled 0.84 and 0.54 for the N and S respectively. These Sentinel-based parcel-level flowering parameters can be combined with weather data to support in-season predictions of OSR yield, area, and production. Our approach identified the unique temporal signatures of S1 and S2 associated with OSR flowering and can now be applied to monitor OSR phenology for parcels across the globe.
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spelling pubmed-70433382020-03-15 Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series d’Andrimont, Raphaël Taymans, Matthieu Lemoine, Guido Ceglar, Andrej Yordanov, Momchil van der Velde, Marijn Remote Sens Environ Article A novel methodology is proposed to robustly map oil seed rape (OSR) flowering phenology from time series generated from the Copernicus Sentinel-1 (S1) and Sentinel-2 (S2) sensors. The time series are averaged at parcel level, initially for a set of 229 reference parcels for which multiple phenological observations on OSR flowering have been collected from April 21 to May 19, 2018. The set of OSR parcels is extended to a regional sample of 32,355 OSR parcels derived from a regional S2 classification. The study area comprises the northern Brandenburg and Mecklenburg-Vorpommern (N) and the southern Bavaria (S) regions in Germany. A method was developed to automatically compute peak flowering at parcel level from the S2 time signature of the Normalized Difference Yellow Index (NDYI) and from the local minimum in S1 VV polarized backscattering coefficients. Peak flowering was determined at a temporal accuracy of 1 to 4 days. A systematic flowering delay of 1 day was observed in the S1 detection compared to S2. Peak flowering differed by 12 days between the N and S. Considerable local variation was observed in the N-S parcel-level flowering gradient. Additional in-situ phenology observations at 70 Deutscher Wetterdienst (DWD) stations confirm the spatial and temporal consistency between S1 and S2 signatures and flowering phenology across both regions. Conditions during flowering strongly determine OSR yield, therefore, the capacity to continuously characterize spatially the timing of key flowering dates across large areas is key. To illustrate this, expected flowering dates were simulated assuming a single OSR variety with a 425 growing degree days (GDD) requirement to reach flowering. This GDD requirement was calculated based on parcel-level peak flowering dates and temperatures accumulated from 25-km gridded meteorological data. The correlation between simulated and S2 observed peak flowering dates still equaled 0.84 and 0.54 for the N and S respectively. These Sentinel-based parcel-level flowering parameters can be combined with weather data to support in-season predictions of OSR yield, area, and production. Our approach identified the unique temporal signatures of S1 and S2 associated with OSR flowering and can now be applied to monitor OSR phenology for parcels across the globe. American Elsevier Pub. Co 2020-03-15 /pmc/articles/PMC7043338/ /pubmed/32184531 http://dx.doi.org/10.1016/j.rse.2020.111660 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
d’Andrimont, Raphaël
Taymans, Matthieu
Lemoine, Guido
Ceglar, Andrej
Yordanov, Momchil
van der Velde, Marijn
Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series
title Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series
title_full Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series
title_fullStr Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series
title_full_unstemmed Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series
title_short Detecting flowering phenology in oil seed rape parcels with Sentinel-1 and -2 time series
title_sort detecting flowering phenology in oil seed rape parcels with sentinel-1 and -2 time series
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7043338/
https://www.ncbi.nlm.nih.gov/pubmed/32184531
http://dx.doi.org/10.1016/j.rse.2020.111660
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