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Bayesian credible subgroup identification for treatment effectiveness in time-to-event data
Due to differential treatment responses of patients to pharmacotherapy, drug development and practice in medicine are concerned with personalized medicine, which includes identifying subgroups of population that exhibit differential treatment effect. For time–to–event data, available methods only fo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7043747/ https://www.ncbi.nlm.nih.gov/pubmed/32101562 http://dx.doi.org/10.1371/journal.pone.0229336 |
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author | Ngo, Duy Baumgartner, Richard Mt-Isa, Shahrul Feng, Dai Chen, Jie Schnell, Patrick |
author_facet | Ngo, Duy Baumgartner, Richard Mt-Isa, Shahrul Feng, Dai Chen, Jie Schnell, Patrick |
author_sort | Ngo, Duy |
collection | PubMed |
description | Due to differential treatment responses of patients to pharmacotherapy, drug development and practice in medicine are concerned with personalized medicine, which includes identifying subgroups of population that exhibit differential treatment effect. For time–to–event data, available methods only focus on detecting and testing treatment–by–covariate interactions and may not consider multiplicity. In this work, we introduce the Bayesian credible subgroups approach for time–to–event endpoints. It provides two bounding subgroups for the true benefiting subgroup: one which is likely to be contained by the benefiting subgroup and one which is likely to contain the benefiting subgroup. A personalized treatment effect is estimated by two common measures of survival time: the hazard ratio and restricted mean survival time. We apply the method to identify benefiting subgroups in a case study of prostate carcinoma patients and a simulated large clinical dataset. |
format | Online Article Text |
id | pubmed-7043747 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-70437472020-03-09 Bayesian credible subgroup identification for treatment effectiveness in time-to-event data Ngo, Duy Baumgartner, Richard Mt-Isa, Shahrul Feng, Dai Chen, Jie Schnell, Patrick PLoS One Research Article Due to differential treatment responses of patients to pharmacotherapy, drug development and practice in medicine are concerned with personalized medicine, which includes identifying subgroups of population that exhibit differential treatment effect. For time–to–event data, available methods only focus on detecting and testing treatment–by–covariate interactions and may not consider multiplicity. In this work, we introduce the Bayesian credible subgroups approach for time–to–event endpoints. It provides two bounding subgroups for the true benefiting subgroup: one which is likely to be contained by the benefiting subgroup and one which is likely to contain the benefiting subgroup. A personalized treatment effect is estimated by two common measures of survival time: the hazard ratio and restricted mean survival time. We apply the method to identify benefiting subgroups in a case study of prostate carcinoma patients and a simulated large clinical dataset. Public Library of Science 2020-02-26 /pmc/articles/PMC7043747/ /pubmed/32101562 http://dx.doi.org/10.1371/journal.pone.0229336 Text en © 2020 Ngo et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Ngo, Duy Baumgartner, Richard Mt-Isa, Shahrul Feng, Dai Chen, Jie Schnell, Patrick Bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
title | Bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
title_full | Bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
title_fullStr | Bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
title_full_unstemmed | Bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
title_short | Bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
title_sort | bayesian credible subgroup identification for treatment effectiveness in time-to-event data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7043747/ https://www.ncbi.nlm.nih.gov/pubmed/32101562 http://dx.doi.org/10.1371/journal.pone.0229336 |
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