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Dictionary learning in Fourier-transform scanning tunneling spectroscopy
Modern high-resolution microscopes are commonly used to study specimens that have dense and aperiodic spatial structure. Extracting meaningful information from images obtained from such microscopes remains a formidable challenge. Fourier analysis is commonly used to analyze the structure of such ima...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7044214/ https://www.ncbi.nlm.nih.gov/pubmed/32102995 http://dx.doi.org/10.1038/s41467-020-14633-1 |
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author | Cheung, Sky C. Shin, John Y. Lau, Yenson Chen, Zhengyu Sun, Ju Zhang, Yuqian Müller, Marvin A. Eremin, Ilya M. Wright, John N. Pasupathy, Abhay N. |
author_facet | Cheung, Sky C. Shin, John Y. Lau, Yenson Chen, Zhengyu Sun, Ju Zhang, Yuqian Müller, Marvin A. Eremin, Ilya M. Wright, John N. Pasupathy, Abhay N. |
author_sort | Cheung, Sky C. |
collection | PubMed |
description | Modern high-resolution microscopes are commonly used to study specimens that have dense and aperiodic spatial structure. Extracting meaningful information from images obtained from such microscopes remains a formidable challenge. Fourier analysis is commonly used to analyze the structure of such images. However, the Fourier transform fundamentally suffers from severe phase noise when applied to aperiodic images. Here, we report the development of an algorithm based on nonconvex optimization that directly uncovers the fundamental motifs present in a real-space image. Apart from being quantitatively superior to traditional Fourier analysis, we show that this algorithm also uncovers phase sensitive information about the underlying motif structure. We demonstrate its usefulness by studying scanning tunneling microscopy images of a Co-doped iron arsenide superconductor and prove that the application of the algorithm allows for the complete recovery of quasiparticle interference in this material. |
format | Online Article Text |
id | pubmed-7044214 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70442142020-03-04 Dictionary learning in Fourier-transform scanning tunneling spectroscopy Cheung, Sky C. Shin, John Y. Lau, Yenson Chen, Zhengyu Sun, Ju Zhang, Yuqian Müller, Marvin A. Eremin, Ilya M. Wright, John N. Pasupathy, Abhay N. Nat Commun Article Modern high-resolution microscopes are commonly used to study specimens that have dense and aperiodic spatial structure. Extracting meaningful information from images obtained from such microscopes remains a formidable challenge. Fourier analysis is commonly used to analyze the structure of such images. However, the Fourier transform fundamentally suffers from severe phase noise when applied to aperiodic images. Here, we report the development of an algorithm based on nonconvex optimization that directly uncovers the fundamental motifs present in a real-space image. Apart from being quantitatively superior to traditional Fourier analysis, we show that this algorithm also uncovers phase sensitive information about the underlying motif structure. We demonstrate its usefulness by studying scanning tunneling microscopy images of a Co-doped iron arsenide superconductor and prove that the application of the algorithm allows for the complete recovery of quasiparticle interference in this material. Nature Publishing Group UK 2020-02-26 /pmc/articles/PMC7044214/ /pubmed/32102995 http://dx.doi.org/10.1038/s41467-020-14633-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Cheung, Sky C. Shin, John Y. Lau, Yenson Chen, Zhengyu Sun, Ju Zhang, Yuqian Müller, Marvin A. Eremin, Ilya M. Wright, John N. Pasupathy, Abhay N. Dictionary learning in Fourier-transform scanning tunneling spectroscopy |
title | Dictionary learning in Fourier-transform scanning tunneling spectroscopy |
title_full | Dictionary learning in Fourier-transform scanning tunneling spectroscopy |
title_fullStr | Dictionary learning in Fourier-transform scanning tunneling spectroscopy |
title_full_unstemmed | Dictionary learning in Fourier-transform scanning tunneling spectroscopy |
title_short | Dictionary learning in Fourier-transform scanning tunneling spectroscopy |
title_sort | dictionary learning in fourier-transform scanning tunneling spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7044214/ https://www.ncbi.nlm.nih.gov/pubmed/32102995 http://dx.doi.org/10.1038/s41467-020-14633-1 |
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