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Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
OBJECTIVES: Staphylococcus epidermidis is the primary causative agent of infections associated with indwelling biomaterials. Antibiotic susceptibility patterns, Biofilm formation capability, and screening of responsible genes in biofilm formation procedure in clinical isolates (icaA, icaB, icaC, ica...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7045379/ https://www.ncbi.nlm.nih.gov/pubmed/32103775 http://dx.doi.org/10.1186/s13104-020-04965-y |
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author | Mirzaei, Bahman Faridifar, Peyman Shahmoradi, Mostafa Shapouri, Reza Iranpour, Fatemeh Haghi, Fakhri Ezzedin, Mahnaz Babaei, Reyhaneh Mousavi, Seyed Fazlollah |
author_facet | Mirzaei, Bahman Faridifar, Peyman Shahmoradi, Mostafa Shapouri, Reza Iranpour, Fatemeh Haghi, Fakhri Ezzedin, Mahnaz Babaei, Reyhaneh Mousavi, Seyed Fazlollah |
author_sort | Mirzaei, Bahman |
collection | PubMed |
description | OBJECTIVES: Staphylococcus epidermidis is the primary causative agent of infections associated with indwelling biomaterials. Antibiotic susceptibility patterns, Biofilm formation capability, and screening of responsible genes in biofilm formation procedure in clinical isolates (icaA, icaB, icaC, icaD, sdrG, and atlE) were assigned as the main objectives in this study. The clinical samples were analyzed via standard biochemical assays for identifying different bacteria which were confirmed using the multiplex colony PCR method. Subsequently, biofilm-formation capability, antibiotic susceptibility testing, and the frequency of genes responsible for biofilm formation in the confirmed strains were checked. RESULTS: Out of 183 clinical specimens 54 S. epidermidis isolates were detected by targeting a housekeeping gene (sesc) taking advantage of the PCR procedure. All of the strains were Biofilm forming producers. The in vitro biofilm formation assays determined that 45 (83.33%), 5 (9.26%), 4 (7.41%) were strong, moderate, and weak biofilm former strains respectively. Among the isolated strains, the specific frequencies of the biofilm-forming genes were specified to be (98%) for sdrG, (84%) for atlE, (80%) for icaC, and (70%) for icaD. Cefamandole and Amikacin are the most effective antibiotics in isolated strains. All strains were ascertained to be methicillin and amoxicillin/clavulanic acid resistant. |
format | Online Article Text |
id | pubmed-7045379 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-70453792020-03-03 Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens Mirzaei, Bahman Faridifar, Peyman Shahmoradi, Mostafa Shapouri, Reza Iranpour, Fatemeh Haghi, Fakhri Ezzedin, Mahnaz Babaei, Reyhaneh Mousavi, Seyed Fazlollah BMC Res Notes Research Note OBJECTIVES: Staphylococcus epidermidis is the primary causative agent of infections associated with indwelling biomaterials. Antibiotic susceptibility patterns, Biofilm formation capability, and screening of responsible genes in biofilm formation procedure in clinical isolates (icaA, icaB, icaC, icaD, sdrG, and atlE) were assigned as the main objectives in this study. The clinical samples were analyzed via standard biochemical assays for identifying different bacteria which were confirmed using the multiplex colony PCR method. Subsequently, biofilm-formation capability, antibiotic susceptibility testing, and the frequency of genes responsible for biofilm formation in the confirmed strains were checked. RESULTS: Out of 183 clinical specimens 54 S. epidermidis isolates were detected by targeting a housekeeping gene (sesc) taking advantage of the PCR procedure. All of the strains were Biofilm forming producers. The in vitro biofilm formation assays determined that 45 (83.33%), 5 (9.26%), 4 (7.41%) were strong, moderate, and weak biofilm former strains respectively. Among the isolated strains, the specific frequencies of the biofilm-forming genes were specified to be (98%) for sdrG, (84%) for atlE, (80%) for icaC, and (70%) for icaD. Cefamandole and Amikacin are the most effective antibiotics in isolated strains. All strains were ascertained to be methicillin and amoxicillin/clavulanic acid resistant. BioMed Central 2020-02-27 /pmc/articles/PMC7045379/ /pubmed/32103775 http://dx.doi.org/10.1186/s13104-020-04965-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Note Mirzaei, Bahman Faridifar, Peyman Shahmoradi, Mostafa Shapouri, Reza Iranpour, Fatemeh Haghi, Fakhri Ezzedin, Mahnaz Babaei, Reyhaneh Mousavi, Seyed Fazlollah Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens |
title | Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens |
title_full | Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens |
title_fullStr | Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens |
title_full_unstemmed | Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens |
title_short | Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens |
title_sort | genotypic and phenotypic analysis of biofilm formation staphylococcus epidermidis isolates from clinical specimens |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7045379/ https://www.ncbi.nlm.nih.gov/pubmed/32103775 http://dx.doi.org/10.1186/s13104-020-04965-y |
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