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Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens

OBJECTIVES: Staphylococcus epidermidis is the primary causative agent of infections associated with indwelling biomaterials. Antibiotic susceptibility patterns, Biofilm formation capability, and screening of responsible genes in biofilm formation procedure in clinical isolates (icaA, icaB, icaC, ica...

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Autores principales: Mirzaei, Bahman, Faridifar, Peyman, Shahmoradi, Mostafa, Shapouri, Reza, Iranpour, Fatemeh, Haghi, Fakhri, Ezzedin, Mahnaz, Babaei, Reyhaneh, Mousavi, Seyed Fazlollah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7045379/
https://www.ncbi.nlm.nih.gov/pubmed/32103775
http://dx.doi.org/10.1186/s13104-020-04965-y
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author Mirzaei, Bahman
Faridifar, Peyman
Shahmoradi, Mostafa
Shapouri, Reza
Iranpour, Fatemeh
Haghi, Fakhri
Ezzedin, Mahnaz
Babaei, Reyhaneh
Mousavi, Seyed Fazlollah
author_facet Mirzaei, Bahman
Faridifar, Peyman
Shahmoradi, Mostafa
Shapouri, Reza
Iranpour, Fatemeh
Haghi, Fakhri
Ezzedin, Mahnaz
Babaei, Reyhaneh
Mousavi, Seyed Fazlollah
author_sort Mirzaei, Bahman
collection PubMed
description OBJECTIVES: Staphylococcus epidermidis is the primary causative agent of infections associated with indwelling biomaterials. Antibiotic susceptibility patterns, Biofilm formation capability, and screening of responsible genes in biofilm formation procedure in clinical isolates (icaA, icaB, icaC, icaD, sdrG, and atlE) were assigned as the main objectives in this study. The clinical samples were analyzed via standard biochemical assays for identifying different bacteria which were confirmed using the multiplex colony PCR method. Subsequently, biofilm-formation capability, antibiotic susceptibility testing, and the frequency of genes responsible for biofilm formation in the confirmed strains were checked. RESULTS: Out of 183 clinical specimens 54 S. epidermidis isolates were detected by targeting a housekeeping gene (sesc) taking advantage of the PCR procedure. All of the strains were Biofilm forming producers. The in vitro biofilm formation assays determined that 45 (83.33%), 5 (9.26%), 4 (7.41%) were strong, moderate, and weak biofilm former strains respectively. Among the isolated strains, the specific frequencies of the biofilm-forming genes were specified to be (98%) for sdrG, (84%) for atlE, (80%) for icaC, and (70%) for icaD. Cefamandole and Amikacin are the most effective antibiotics in isolated strains. All strains were ascertained to be methicillin and amoxicillin/clavulanic acid resistant.
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spelling pubmed-70453792020-03-03 Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens Mirzaei, Bahman Faridifar, Peyman Shahmoradi, Mostafa Shapouri, Reza Iranpour, Fatemeh Haghi, Fakhri Ezzedin, Mahnaz Babaei, Reyhaneh Mousavi, Seyed Fazlollah BMC Res Notes Research Note OBJECTIVES: Staphylococcus epidermidis is the primary causative agent of infections associated with indwelling biomaterials. Antibiotic susceptibility patterns, Biofilm formation capability, and screening of responsible genes in biofilm formation procedure in clinical isolates (icaA, icaB, icaC, icaD, sdrG, and atlE) were assigned as the main objectives in this study. The clinical samples were analyzed via standard biochemical assays for identifying different bacteria which were confirmed using the multiplex colony PCR method. Subsequently, biofilm-formation capability, antibiotic susceptibility testing, and the frequency of genes responsible for biofilm formation in the confirmed strains were checked. RESULTS: Out of 183 clinical specimens 54 S. epidermidis isolates were detected by targeting a housekeeping gene (sesc) taking advantage of the PCR procedure. All of the strains were Biofilm forming producers. The in vitro biofilm formation assays determined that 45 (83.33%), 5 (9.26%), 4 (7.41%) were strong, moderate, and weak biofilm former strains respectively. Among the isolated strains, the specific frequencies of the biofilm-forming genes were specified to be (98%) for sdrG, (84%) for atlE, (80%) for icaC, and (70%) for icaD. Cefamandole and Amikacin are the most effective antibiotics in isolated strains. All strains were ascertained to be methicillin and amoxicillin/clavulanic acid resistant. BioMed Central 2020-02-27 /pmc/articles/PMC7045379/ /pubmed/32103775 http://dx.doi.org/10.1186/s13104-020-04965-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Note
Mirzaei, Bahman
Faridifar, Peyman
Shahmoradi, Mostafa
Shapouri, Reza
Iranpour, Fatemeh
Haghi, Fakhri
Ezzedin, Mahnaz
Babaei, Reyhaneh
Mousavi, Seyed Fazlollah
Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
title Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
title_full Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
title_fullStr Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
title_full_unstemmed Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
title_short Genotypic and phenotypic analysis of biofilm formation Staphylococcus epidermidis isolates from clinical specimens
title_sort genotypic and phenotypic analysis of biofilm formation staphylococcus epidermidis isolates from clinical specimens
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7045379/
https://www.ncbi.nlm.nih.gov/pubmed/32103775
http://dx.doi.org/10.1186/s13104-020-04965-y
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