Cargando…

The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments

Sandy sediments cover 50–60% of the continental shelves and are highly efficient bioreactors in which organic carbon is remineralized and inorganic nitrogen is reduced to N(2). As such they seem to play an important role, buffering the open ocean from anthropogenic nitrogen inputs and likely reminer...

Descripción completa

Detalles Bibliográficos
Autores principales: Ahmerkamp, Soeren, Marchant, Hannah K, Peng, Chao, Probandt, David, Littmann, Sten, Kuypers, Marcel M. M., Holtappels, Moritz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7046789/
https://www.ncbi.nlm.nih.gov/pubmed/32107429
http://dx.doi.org/10.1038/s41598-020-60557-7
_version_ 1783502023872741376
author Ahmerkamp, Soeren
Marchant, Hannah K
Peng, Chao
Probandt, David
Littmann, Sten
Kuypers, Marcel M. M.
Holtappels, Moritz
author_facet Ahmerkamp, Soeren
Marchant, Hannah K
Peng, Chao
Probandt, David
Littmann, Sten
Kuypers, Marcel M. M.
Holtappels, Moritz
author_sort Ahmerkamp, Soeren
collection PubMed
description Sandy sediments cover 50–60% of the continental shelves and are highly efficient bioreactors in which organic carbon is remineralized and inorganic nitrogen is reduced to N(2). As such they seem to play an important role, buffering the open ocean from anthropogenic nitrogen inputs and likely remineralizing the vast amounts of organic matter formed in the highly productive surface waters. To date however, little is known about the interrelation between porewater transport, grain properties and microbial colonization and the consequences for remineralization rates in sandy sediments. To constrain the effect of theses factors on remineralization in silicate sands, we incubated North Sea sediments in flow-through reactors after separating into five different grain size fractions. Bulk sediment and sediment grain properties were measured along with microbial colonization and cell abundances, oxygen consumption and denitrification rates. Volumetric oxygen consumption ranged from 14 to 77 µmol O(2) l(−1) h(−1) while nitrogen-loss via denitrification was between 3.7 and 8.4 µmol N l(−1) h(−1). Oxygen consumption and denitrification rates were linearly correlated to the microbial cell abundances, which ranged from 2.9 to 5.4·10(8) cells cm(−3). We found, that cell abundance and consumption rates in sandy sediments are influenced (i) by the surface area available for microbial colonization and (ii) by the exposure of these surfaces to the solute-supplying porewater flow. While protective structures such as cracks and depressions promote microbial colonization, the oxygen demand is only met by good ventilation of these structures, which is supported by a high sphericity of the grains. Based on our results, spherical sand grains with small depressions, i.e. golf ball like structures, provide the optimal supporting mineral structure for microorganisms on continental shelves.
format Online
Article
Text
id pubmed-7046789
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-70467892020-03-05 The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments Ahmerkamp, Soeren Marchant, Hannah K Peng, Chao Probandt, David Littmann, Sten Kuypers, Marcel M. M. Holtappels, Moritz Sci Rep Article Sandy sediments cover 50–60% of the continental shelves and are highly efficient bioreactors in which organic carbon is remineralized and inorganic nitrogen is reduced to N(2). As such they seem to play an important role, buffering the open ocean from anthropogenic nitrogen inputs and likely remineralizing the vast amounts of organic matter formed in the highly productive surface waters. To date however, little is known about the interrelation between porewater transport, grain properties and microbial colonization and the consequences for remineralization rates in sandy sediments. To constrain the effect of theses factors on remineralization in silicate sands, we incubated North Sea sediments in flow-through reactors after separating into five different grain size fractions. Bulk sediment and sediment grain properties were measured along with microbial colonization and cell abundances, oxygen consumption and denitrification rates. Volumetric oxygen consumption ranged from 14 to 77 µmol O(2) l(−1) h(−1) while nitrogen-loss via denitrification was between 3.7 and 8.4 µmol N l(−1) h(−1). Oxygen consumption and denitrification rates were linearly correlated to the microbial cell abundances, which ranged from 2.9 to 5.4·10(8) cells cm(−3). We found, that cell abundance and consumption rates in sandy sediments are influenced (i) by the surface area available for microbial colonization and (ii) by the exposure of these surfaces to the solute-supplying porewater flow. While protective structures such as cracks and depressions promote microbial colonization, the oxygen demand is only met by good ventilation of these structures, which is supported by a high sphericity of the grains. Based on our results, spherical sand grains with small depressions, i.e. golf ball like structures, provide the optimal supporting mineral structure for microorganisms on continental shelves. Nature Publishing Group UK 2020-02-27 /pmc/articles/PMC7046789/ /pubmed/32107429 http://dx.doi.org/10.1038/s41598-020-60557-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ahmerkamp, Soeren
Marchant, Hannah K
Peng, Chao
Probandt, David
Littmann, Sten
Kuypers, Marcel M. M.
Holtappels, Moritz
The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
title The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
title_full The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
title_fullStr The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
title_full_unstemmed The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
title_short The effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
title_sort effect of sediment grain properties and porewater flow on microbial abundance and respiration in permeable sediments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7046789/
https://www.ncbi.nlm.nih.gov/pubmed/32107429
http://dx.doi.org/10.1038/s41598-020-60557-7
work_keys_str_mv AT ahmerkampsoeren theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT marchanthannahk theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT pengchao theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT probandtdavid theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT littmannsten theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT kuypersmarcelmm theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT holtappelsmoritz theeffectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT ahmerkampsoeren effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT marchanthannahk effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT pengchao effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT probandtdavid effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT littmannsten effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT kuypersmarcelmm effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments
AT holtappelsmoritz effectofsedimentgrainpropertiesandporewaterflowonmicrobialabundanceandrespirationinpermeablesediments