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Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans

Engineered nanoparticles are used at an increasing rate in both industry and medicine without fully understanding their impact on health and environment. The nematode Caenorhabditis elegans is a suitable model to study the toxic effects of nanoparticles as it is amenable to comprehensive phenotyping...

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Autores principales: Viau, Charles, Haçariz, Orçun, Karimian, Farial, Xia, Jianguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049462/
https://www.ncbi.nlm.nih.gov/pubmed/32149031
http://dx.doi.org/10.7717/peerj.8684
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author Viau, Charles
Haçariz, Orçun
Karimian, Farial
Xia, Jianguo
author_facet Viau, Charles
Haçariz, Orçun
Karimian, Farial
Xia, Jianguo
author_sort Viau, Charles
collection PubMed
description Engineered nanoparticles are used at an increasing rate in both industry and medicine without fully understanding their impact on health and environment. The nematode Caenorhabditis elegans is a suitable model to study the toxic effects of nanoparticles as it is amenable to comprehensive phenotyping, such as locomotion, growth, neurotoxicity and reproduction. In this study, we systematically evaluated the effects of silver (Ag) and five metal oxide nanoparticles: SiO(2), CeO(2), CuO, Al(2)O(3) and TiO(2). The results showed that Ag and SiO(2) exposures had the most toxic effects on locomotion velocity, growth and reproduction, whereas CeO(2), Al(2)O(3) and CuO exposures were mostly neurotoxic. We further performed RNAseq to compare the gene expression profiles underlying Ag and SiO(2)toxicities. Gene set enrichment analyses revealed that exposures to Ag and SiO(2)consistently downregulated several biological processes (regulations in locomotion, reproductive process and cell growth) and pathways (neuroactive ligand-receptor interaction, wnt and MAPK signaling, etc.), with opposite effects on genes involved in innate immunity. Our results contribute to mechanistic insights into toxicity of Ag and SiO(2) nanoparticles and demonstrated that C. elegans as a valuable model for nanotoxicity assessment.
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spelling pubmed-70494622020-03-06 Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans Viau, Charles Haçariz, Orçun Karimian, Farial Xia, Jianguo PeerJ Bioinformatics Engineered nanoparticles are used at an increasing rate in both industry and medicine without fully understanding their impact on health and environment. The nematode Caenorhabditis elegans is a suitable model to study the toxic effects of nanoparticles as it is amenable to comprehensive phenotyping, such as locomotion, growth, neurotoxicity and reproduction. In this study, we systematically evaluated the effects of silver (Ag) and five metal oxide nanoparticles: SiO(2), CeO(2), CuO, Al(2)O(3) and TiO(2). The results showed that Ag and SiO(2) exposures had the most toxic effects on locomotion velocity, growth and reproduction, whereas CeO(2), Al(2)O(3) and CuO exposures were mostly neurotoxic. We further performed RNAseq to compare the gene expression profiles underlying Ag and SiO(2)toxicities. Gene set enrichment analyses revealed that exposures to Ag and SiO(2)consistently downregulated several biological processes (regulations in locomotion, reproductive process and cell growth) and pathways (neuroactive ligand-receptor interaction, wnt and MAPK signaling, etc.), with opposite effects on genes involved in innate immunity. Our results contribute to mechanistic insights into toxicity of Ag and SiO(2) nanoparticles and demonstrated that C. elegans as a valuable model for nanotoxicity assessment. PeerJ Inc. 2020-02-27 /pmc/articles/PMC7049462/ /pubmed/32149031 http://dx.doi.org/10.7717/peerj.8684 Text en ©2020 Viau et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Viau, Charles
Haçariz, Orçun
Karimian, Farial
Xia, Jianguo
Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
title Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
title_full Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
title_fullStr Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
title_full_unstemmed Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
title_short Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
title_sort comprehensive phenotyping and transcriptome profiling to study nanotoxicity in c. elegans
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049462/
https://www.ncbi.nlm.nih.gov/pubmed/32149031
http://dx.doi.org/10.7717/peerj.8684
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