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Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans
Engineered nanoparticles are used at an increasing rate in both industry and medicine without fully understanding their impact on health and environment. The nematode Caenorhabditis elegans is a suitable model to study the toxic effects of nanoparticles as it is amenable to comprehensive phenotyping...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049462/ https://www.ncbi.nlm.nih.gov/pubmed/32149031 http://dx.doi.org/10.7717/peerj.8684 |
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author | Viau, Charles Haçariz, Orçun Karimian, Farial Xia, Jianguo |
author_facet | Viau, Charles Haçariz, Orçun Karimian, Farial Xia, Jianguo |
author_sort | Viau, Charles |
collection | PubMed |
description | Engineered nanoparticles are used at an increasing rate in both industry and medicine without fully understanding their impact on health and environment. The nematode Caenorhabditis elegans is a suitable model to study the toxic effects of nanoparticles as it is amenable to comprehensive phenotyping, such as locomotion, growth, neurotoxicity and reproduction. In this study, we systematically evaluated the effects of silver (Ag) and five metal oxide nanoparticles: SiO(2), CeO(2), CuO, Al(2)O(3) and TiO(2). The results showed that Ag and SiO(2) exposures had the most toxic effects on locomotion velocity, growth and reproduction, whereas CeO(2), Al(2)O(3) and CuO exposures were mostly neurotoxic. We further performed RNAseq to compare the gene expression profiles underlying Ag and SiO(2)toxicities. Gene set enrichment analyses revealed that exposures to Ag and SiO(2)consistently downregulated several biological processes (regulations in locomotion, reproductive process and cell growth) and pathways (neuroactive ligand-receptor interaction, wnt and MAPK signaling, etc.), with opposite effects on genes involved in innate immunity. Our results contribute to mechanistic insights into toxicity of Ag and SiO(2) nanoparticles and demonstrated that C. elegans as a valuable model for nanotoxicity assessment. |
format | Online Article Text |
id | pubmed-7049462 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70494622020-03-06 Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans Viau, Charles Haçariz, Orçun Karimian, Farial Xia, Jianguo PeerJ Bioinformatics Engineered nanoparticles are used at an increasing rate in both industry and medicine without fully understanding their impact on health and environment. The nematode Caenorhabditis elegans is a suitable model to study the toxic effects of nanoparticles as it is amenable to comprehensive phenotyping, such as locomotion, growth, neurotoxicity and reproduction. In this study, we systematically evaluated the effects of silver (Ag) and five metal oxide nanoparticles: SiO(2), CeO(2), CuO, Al(2)O(3) and TiO(2). The results showed that Ag and SiO(2) exposures had the most toxic effects on locomotion velocity, growth and reproduction, whereas CeO(2), Al(2)O(3) and CuO exposures were mostly neurotoxic. We further performed RNAseq to compare the gene expression profiles underlying Ag and SiO(2)toxicities. Gene set enrichment analyses revealed that exposures to Ag and SiO(2)consistently downregulated several biological processes (regulations in locomotion, reproductive process and cell growth) and pathways (neuroactive ligand-receptor interaction, wnt and MAPK signaling, etc.), with opposite effects on genes involved in innate immunity. Our results contribute to mechanistic insights into toxicity of Ag and SiO(2) nanoparticles and demonstrated that C. elegans as a valuable model for nanotoxicity assessment. PeerJ Inc. 2020-02-27 /pmc/articles/PMC7049462/ /pubmed/32149031 http://dx.doi.org/10.7717/peerj.8684 Text en ©2020 Viau et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Viau, Charles Haçariz, Orçun Karimian, Farial Xia, Jianguo Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans |
title | Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans |
title_full | Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans |
title_fullStr | Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans |
title_full_unstemmed | Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans |
title_short | Comprehensive phenotyping and transcriptome profiling to study nanotoxicity in C. elegans |
title_sort | comprehensive phenotyping and transcriptome profiling to study nanotoxicity in c. elegans |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049462/ https://www.ncbi.nlm.nih.gov/pubmed/32149031 http://dx.doi.org/10.7717/peerj.8684 |
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