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LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
BACKGROUND: LRRK2 mutations have emerged as the most prevalent and potentially treatable determinants of Parkinson's disease (PD). Peculiar geographic distribution of these mutations has triggered an interest in genotyping PD cohorts of different ethnic backgrounds for LRRK. OBJECTIVE: Here, we...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049866/ https://www.ncbi.nlm.nih.gov/pubmed/32148752 http://dx.doi.org/10.1155/2020/2763838 |
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author | Kaiyrzhanov, Rauan Aitkulova, Akbota Shashkin, Chingiz Zharkinbekova, Nazira Rizig, Mie Zholdybayeva, Elena Jarmukhanov, Zharkyn Akhmetzhanov, Vadim Kaishibayeva, Gulnaz Khaibullin, Talgat Karimova, Altynay Akshulakov, Serik Bralov, Askhat Kissamedenov, Nurlan Seidinova, Zhanar Taskinbayeva, Anjela Muratbaikyzy, Aliya Houlden, Henry |
author_facet | Kaiyrzhanov, Rauan Aitkulova, Akbota Shashkin, Chingiz Zharkinbekova, Nazira Rizig, Mie Zholdybayeva, Elena Jarmukhanov, Zharkyn Akhmetzhanov, Vadim Kaishibayeva, Gulnaz Khaibullin, Talgat Karimova, Altynay Akshulakov, Serik Bralov, Askhat Kissamedenov, Nurlan Seidinova, Zhanar Taskinbayeva, Anjela Muratbaikyzy, Aliya Houlden, Henry |
author_sort | Kaiyrzhanov, Rauan |
collection | PubMed |
description | BACKGROUND: LRRK2 mutations have emerged as the most prevalent and potentially treatable determinants of Parkinson's disease (PD). Peculiar geographic distribution of these mutations has triggered an interest in genotyping PD cohorts of different ethnic backgrounds for LRRK. OBJECTIVE: Here, we report on the results of LRRK2 screening in the first Central Asian PD cohort. METHODS: 246 PD patients were consecutively recruited by movement disorder specialists from four medical centers in Kazakhstan, and clinicodemographic data and genomic DNA from blood were systematically obtained and shipped to the Institute of Neurology University College London together with DNAs from 200 healthy controls. The cohort was genotyped for five LRRK2 mutations (p.Gly2019Ser, p.Arg1441His, p.Tyr1699Cys, p.Ile2020Thr, and p.Asn1437His) and three East Asian disease-associated variants (p.Gly2385Arg, p.Ala419Val, and p.Arg1628Pro) via Kompetitive allele-specific polymerase chain reaction assay analysis. RESULTS: None of the study subjects carried LRRK2 mutations, whereas the following Asian variants were found with insignificant odds ratios (OR): p.Gly2385Arg (1.2%, minor allele frequency (MAF) 0.007, OR 1.25, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, CONCLUSIONS: We showed that East Asian LRRK variants could be found in Central Asian populations but their pathogenicity remains to be elucidated in larger PD cohorts. |
format | Online Article Text |
id | pubmed-7049866 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-70498662020-03-07 LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan Kaiyrzhanov, Rauan Aitkulova, Akbota Shashkin, Chingiz Zharkinbekova, Nazira Rizig, Mie Zholdybayeva, Elena Jarmukhanov, Zharkyn Akhmetzhanov, Vadim Kaishibayeva, Gulnaz Khaibullin, Talgat Karimova, Altynay Akshulakov, Serik Bralov, Askhat Kissamedenov, Nurlan Seidinova, Zhanar Taskinbayeva, Anjela Muratbaikyzy, Aliya Houlden, Henry Parkinsons Dis Research Article BACKGROUND: LRRK2 mutations have emerged as the most prevalent and potentially treatable determinants of Parkinson's disease (PD). Peculiar geographic distribution of these mutations has triggered an interest in genotyping PD cohorts of different ethnic backgrounds for LRRK. OBJECTIVE: Here, we report on the results of LRRK2 screening in the first Central Asian PD cohort. METHODS: 246 PD patients were consecutively recruited by movement disorder specialists from four medical centers in Kazakhstan, and clinicodemographic data and genomic DNA from blood were systematically obtained and shipped to the Institute of Neurology University College London together with DNAs from 200 healthy controls. The cohort was genotyped for five LRRK2 mutations (p.Gly2019Ser, p.Arg1441His, p.Tyr1699Cys, p.Ile2020Thr, and p.Asn1437His) and three East Asian disease-associated variants (p.Gly2385Arg, p.Ala419Val, and p.Arg1628Pro) via Kompetitive allele-specific polymerase chain reaction assay analysis. RESULTS: None of the study subjects carried LRRK2 mutations, whereas the following Asian variants were found with insignificant odds ratios (OR): p.Gly2385Arg (1.2%, minor allele frequency (MAF) 0.007, OR 1.25, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, CONCLUSIONS: We showed that East Asian LRRK variants could be found in Central Asian populations but their pathogenicity remains to be elucidated in larger PD cohorts. Hindawi 2020-02-19 /pmc/articles/PMC7049866/ /pubmed/32148752 http://dx.doi.org/10.1155/2020/2763838 Text en Copyright © 2020 Rauan Kaiyrzhanov et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Kaiyrzhanov, Rauan Aitkulova, Akbota Shashkin, Chingiz Zharkinbekova, Nazira Rizig, Mie Zholdybayeva, Elena Jarmukhanov, Zharkyn Akhmetzhanov, Vadim Kaishibayeva, Gulnaz Khaibullin, Talgat Karimova, Altynay Akshulakov, Serik Bralov, Askhat Kissamedenov, Nurlan Seidinova, Zhanar Taskinbayeva, Anjela Muratbaikyzy, Aliya Houlden, Henry LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan |
title | LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan |
title_full | LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan |
title_fullStr | LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan |
title_full_unstemmed | LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan |
title_short | LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan |
title_sort | lrrk2 mutations and asian disease-associated variants in the first parkinson's disease cohort from kazakhstan |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049866/ https://www.ncbi.nlm.nih.gov/pubmed/32148752 http://dx.doi.org/10.1155/2020/2763838 |
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