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LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan

BACKGROUND: LRRK2 mutations have emerged as the most prevalent and potentially treatable determinants of Parkinson's disease (PD). Peculiar geographic distribution of these mutations has triggered an interest in genotyping PD cohorts of different ethnic backgrounds for LRRK. OBJECTIVE: Here, we...

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Autores principales: Kaiyrzhanov, Rauan, Aitkulova, Akbota, Shashkin, Chingiz, Zharkinbekova, Nazira, Rizig, Mie, Zholdybayeva, Elena, Jarmukhanov, Zharkyn, Akhmetzhanov, Vadim, Kaishibayeva, Gulnaz, Khaibullin, Talgat, Karimova, Altynay, Akshulakov, Serik, Bralov, Askhat, Kissamedenov, Nurlan, Seidinova, Zhanar, Taskinbayeva, Anjela, Muratbaikyzy, Aliya, Houlden, Henry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049866/
https://www.ncbi.nlm.nih.gov/pubmed/32148752
http://dx.doi.org/10.1155/2020/2763838
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author Kaiyrzhanov, Rauan
Aitkulova, Akbota
Shashkin, Chingiz
Zharkinbekova, Nazira
Rizig, Mie
Zholdybayeva, Elena
Jarmukhanov, Zharkyn
Akhmetzhanov, Vadim
Kaishibayeva, Gulnaz
Khaibullin, Talgat
Karimova, Altynay
Akshulakov, Serik
Bralov, Askhat
Kissamedenov, Nurlan
Seidinova, Zhanar
Taskinbayeva, Anjela
Muratbaikyzy, Aliya
Houlden, Henry
author_facet Kaiyrzhanov, Rauan
Aitkulova, Akbota
Shashkin, Chingiz
Zharkinbekova, Nazira
Rizig, Mie
Zholdybayeva, Elena
Jarmukhanov, Zharkyn
Akhmetzhanov, Vadim
Kaishibayeva, Gulnaz
Khaibullin, Talgat
Karimova, Altynay
Akshulakov, Serik
Bralov, Askhat
Kissamedenov, Nurlan
Seidinova, Zhanar
Taskinbayeva, Anjela
Muratbaikyzy, Aliya
Houlden, Henry
author_sort Kaiyrzhanov, Rauan
collection PubMed
description BACKGROUND: LRRK2 mutations have emerged as the most prevalent and potentially treatable determinants of Parkinson's disease (PD). Peculiar geographic distribution of these mutations has triggered an interest in genotyping PD cohorts of different ethnic backgrounds for LRRK. OBJECTIVE: Here, we report on the results of LRRK2 screening in the first Central Asian PD cohort. METHODS: 246 PD patients were consecutively recruited by movement disorder specialists from four medical centers in Kazakhstan, and clinicodemographic data and genomic DNA from blood were systematically obtained and shipped to the Institute of Neurology University College London together with DNAs from 200 healthy controls. The cohort was genotyped for five LRRK2 mutations (p.Gly2019Ser, p.Arg1441His, p.Tyr1699Cys, p.Ile2020Thr, and p.Asn1437His) and three East Asian disease-associated variants (p.Gly2385Arg, p.Ala419Val, and p.Arg1628Pro) via Kompetitive allele-specific polymerase chain reaction assay analysis. RESULTS: None of the study subjects carried LRRK2 mutations, whereas the following Asian variants were found with insignificant odds ratios (OR): p.Gly2385Arg (1.2%, minor allele frequency (MAF) 0.007, OR 1.25, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, CONCLUSIONS: We showed that East Asian LRRK variants could be found in Central Asian populations but their pathogenicity remains to be elucidated in larger PD cohorts.
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spelling pubmed-70498662020-03-07 LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan Kaiyrzhanov, Rauan Aitkulova, Akbota Shashkin, Chingiz Zharkinbekova, Nazira Rizig, Mie Zholdybayeva, Elena Jarmukhanov, Zharkyn Akhmetzhanov, Vadim Kaishibayeva, Gulnaz Khaibullin, Talgat Karimova, Altynay Akshulakov, Serik Bralov, Askhat Kissamedenov, Nurlan Seidinova, Zhanar Taskinbayeva, Anjela Muratbaikyzy, Aliya Houlden, Henry Parkinsons Dis Research Article BACKGROUND: LRRK2 mutations have emerged as the most prevalent and potentially treatable determinants of Parkinson's disease (PD). Peculiar geographic distribution of these mutations has triggered an interest in genotyping PD cohorts of different ethnic backgrounds for LRRK. OBJECTIVE: Here, we report on the results of LRRK2 screening in the first Central Asian PD cohort. METHODS: 246 PD patients were consecutively recruited by movement disorder specialists from four medical centers in Kazakhstan, and clinicodemographic data and genomic DNA from blood were systematically obtained and shipped to the Institute of Neurology University College London together with DNAs from 200 healthy controls. The cohort was genotyped for five LRRK2 mutations (p.Gly2019Ser, p.Arg1441His, p.Tyr1699Cys, p.Ile2020Thr, and p.Asn1437His) and three East Asian disease-associated variants (p.Gly2385Arg, p.Ala419Val, and p.Arg1628Pro) via Kompetitive allele-specific polymerase chain reaction assay analysis. RESULTS: None of the study subjects carried LRRK2 mutations, whereas the following Asian variants were found with insignificant odds ratios (OR): p.Gly2385Arg (1.2%, minor allele frequency (MAF) 0.007, OR 1.25, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, p=0.8), p.Ala419Val (3.7%, MAF 0.02, OR 1.5, CONCLUSIONS: We showed that East Asian LRRK variants could be found in Central Asian populations but their pathogenicity remains to be elucidated in larger PD cohorts. Hindawi 2020-02-19 /pmc/articles/PMC7049866/ /pubmed/32148752 http://dx.doi.org/10.1155/2020/2763838 Text en Copyright © 2020 Rauan Kaiyrzhanov et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kaiyrzhanov, Rauan
Aitkulova, Akbota
Shashkin, Chingiz
Zharkinbekova, Nazira
Rizig, Mie
Zholdybayeva, Elena
Jarmukhanov, Zharkyn
Akhmetzhanov, Vadim
Kaishibayeva, Gulnaz
Khaibullin, Talgat
Karimova, Altynay
Akshulakov, Serik
Bralov, Askhat
Kissamedenov, Nurlan
Seidinova, Zhanar
Taskinbayeva, Anjela
Muratbaikyzy, Aliya
Houlden, Henry
LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
title LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
title_full LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
title_fullStr LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
title_full_unstemmed LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
title_short LRRK2 Mutations and Asian Disease-Associated Variants in the First Parkinson's Disease Cohort from Kazakhstan
title_sort lrrk2 mutations and asian disease-associated variants in the first parkinson's disease cohort from kazakhstan
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049866/
https://www.ncbi.nlm.nih.gov/pubmed/32148752
http://dx.doi.org/10.1155/2020/2763838
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