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Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters
The reliability of radiomics features (RFs) is crucial for quantifying tumour heterogeneity. We assessed the influence of imaging, segmentation, and processing conditions (quantization range, bin number, signal-to-noise ratio [SNR], and unintended outliers) on RF measurement. Low SNR and unintended...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7052198/ https://www.ncbi.nlm.nih.gov/pubmed/32123281 http://dx.doi.org/10.1038/s41598-020-60868-9 |
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author | Park, Bum Woo Kim, Jeong Kon Heo, Changhoe Park, Kye Jin |
author_facet | Park, Bum Woo Kim, Jeong Kon Heo, Changhoe Park, Kye Jin |
author_sort | Park, Bum Woo |
collection | PubMed |
description | The reliability of radiomics features (RFs) is crucial for quantifying tumour heterogeneity. We assessed the influence of imaging, segmentation, and processing conditions (quantization range, bin number, signal-to-noise ratio [SNR], and unintended outliers) on RF measurement. Low SNR and unintended outliers increased the standard deviation and mean values of histograms to calculate the first-order RFs. Variations in imaging processing conditions significantly altered the shape of the probability distribution (centre of distribution, extent of dispersion, and segmentation of probability clusters) in second-order RF matrices (i.e. grey-level co-occurrence and grey-level run length), thereby eventually causing fluctuations in RF estimation. Inconsistent imaging and processing conditions decreased the number of reliably measured RFs in terms of individual RF values (intraclass correlation coefficient ≥0.75) and inter-lesion RF ratios (coefficient of variation <15%). No RF could be reliably estimated under inconsistent SNR and inclusion of outlier conditions. By contrast, with high SNR and no outliers, all first-order RFs, 11 (42%) grey-level co-occurrence RFs and five (42%) grey-level run length RFs showed acceptable reliability. Our study suggests that optimization of SNR, exclusion of outliers, and application of relevant quantization range and bin number should be performed to ensure the robustness of radiomics studies assessing tumor heterogeneity. |
format | Online Article Text |
id | pubmed-7052198 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70521982020-03-06 Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters Park, Bum Woo Kim, Jeong Kon Heo, Changhoe Park, Kye Jin Sci Rep Article The reliability of radiomics features (RFs) is crucial for quantifying tumour heterogeneity. We assessed the influence of imaging, segmentation, and processing conditions (quantization range, bin number, signal-to-noise ratio [SNR], and unintended outliers) on RF measurement. Low SNR and unintended outliers increased the standard deviation and mean values of histograms to calculate the first-order RFs. Variations in imaging processing conditions significantly altered the shape of the probability distribution (centre of distribution, extent of dispersion, and segmentation of probability clusters) in second-order RF matrices (i.e. grey-level co-occurrence and grey-level run length), thereby eventually causing fluctuations in RF estimation. Inconsistent imaging and processing conditions decreased the number of reliably measured RFs in terms of individual RF values (intraclass correlation coefficient ≥0.75) and inter-lesion RF ratios (coefficient of variation <15%). No RF could be reliably estimated under inconsistent SNR and inclusion of outlier conditions. By contrast, with high SNR and no outliers, all first-order RFs, 11 (42%) grey-level co-occurrence RFs and five (42%) grey-level run length RFs showed acceptable reliability. Our study suggests that optimization of SNR, exclusion of outliers, and application of relevant quantization range and bin number should be performed to ensure the robustness of radiomics studies assessing tumor heterogeneity. Nature Publishing Group UK 2020-03-02 /pmc/articles/PMC7052198/ /pubmed/32123281 http://dx.doi.org/10.1038/s41598-020-60868-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Park, Bum Woo Kim, Jeong Kon Heo, Changhoe Park, Kye Jin Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
title | Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
title_full | Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
title_fullStr | Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
title_full_unstemmed | Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
title_short | Reliability of CT radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
title_sort | reliability of ct radiomic features reflecting tumour heterogeneity according to image quality and image processing parameters |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7052198/ https://www.ncbi.nlm.nih.gov/pubmed/32123281 http://dx.doi.org/10.1038/s41598-020-60868-9 |
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