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Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals

Innovative new crystallographic methods are facilitating structural studies from ever smaller crystals of biological macromolecules. In particular, serial X-ray crystallography and microcrystal electron diffraction (MicroED) have emerged as useful methods for obtaining structural information from cr...

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Autores principales: Wolff, Alexander M., Young, Iris D., Sierra, Raymond G., Brewster, Aaron S., Martynowycz, Michael W., Nango, Eriko, Sugahara, Michihiro, Nakane, Takanori, Ito, Kazutaka, Aquila, Andrew, Bhowmick, Asmit, Biel, Justin T., Carbajo, Sergio, Cohen, Aina E., Cortez, Saul, Gonzalez, Ana, Hino, Tomoya, Im, Dohyun, Koralek, Jake D., Kubo, Minoru, Lazarou, Tomas S., Nomura, Takashi, Owada, Shigeki, Samelson, Avi J., Tanaka, Tomoyuki, Tanaka, Rie, Thompson, Erin M., van den Bedem, Henry, Woldeyes, Rahel A., Yumoto, Fumiaki, Zhao, Wei, Tono, Kensuke, Boutet, Sebastien, Iwata, So, Gonen, Tamir, Sauter, Nicholas K., Fraser, James S., Thompson, Michael C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7055375/
https://www.ncbi.nlm.nih.gov/pubmed/32148858
http://dx.doi.org/10.1107/S205225252000072X
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author Wolff, Alexander M.
Young, Iris D.
Sierra, Raymond G.
Brewster, Aaron S.
Martynowycz, Michael W.
Nango, Eriko
Sugahara, Michihiro
Nakane, Takanori
Ito, Kazutaka
Aquila, Andrew
Bhowmick, Asmit
Biel, Justin T.
Carbajo, Sergio
Cohen, Aina E.
Cortez, Saul
Gonzalez, Ana
Hino, Tomoya
Im, Dohyun
Koralek, Jake D.
Kubo, Minoru
Lazarou, Tomas S.
Nomura, Takashi
Owada, Shigeki
Samelson, Avi J.
Tanaka, Tomoyuki
Tanaka, Rie
Thompson, Erin M.
van den Bedem, Henry
Woldeyes, Rahel A.
Yumoto, Fumiaki
Zhao, Wei
Tono, Kensuke
Boutet, Sebastien
Iwata, So
Gonen, Tamir
Sauter, Nicholas K.
Fraser, James S.
Thompson, Michael C.
author_facet Wolff, Alexander M.
Young, Iris D.
Sierra, Raymond G.
Brewster, Aaron S.
Martynowycz, Michael W.
Nango, Eriko
Sugahara, Michihiro
Nakane, Takanori
Ito, Kazutaka
Aquila, Andrew
Bhowmick, Asmit
Biel, Justin T.
Carbajo, Sergio
Cohen, Aina E.
Cortez, Saul
Gonzalez, Ana
Hino, Tomoya
Im, Dohyun
Koralek, Jake D.
Kubo, Minoru
Lazarou, Tomas S.
Nomura, Takashi
Owada, Shigeki
Samelson, Avi J.
Tanaka, Tomoyuki
Tanaka, Rie
Thompson, Erin M.
van den Bedem, Henry
Woldeyes, Rahel A.
Yumoto, Fumiaki
Zhao, Wei
Tono, Kensuke
Boutet, Sebastien
Iwata, So
Gonen, Tamir
Sauter, Nicholas K.
Fraser, James S.
Thompson, Michael C.
author_sort Wolff, Alexander M.
collection PubMed
description Innovative new crystallographic methods are facilitating structural studies from ever smaller crystals of biological macromolecules. In particular, serial X-ray crystallography and microcrystal electron diffraction (MicroED) have emerged as useful methods for obtaining structural information from crystals on the nanometre to micrometre scale. Despite the utility of these methods, their implementation can often be difficult, as they present many challenges that are not encountered in traditional macromolecular crystallography experiments. Here, XFEL serial crystallography experiments and MicroED experiments using batch-grown microcrystals of the enzyme cyclophilin A are described. The results provide a roadmap for researchers hoping to design macromolecular microcrystallography experiments, and they highlight the strengths and weaknesses of the two methods. Specifically, we focus on how the different physical conditions imposed by the sample-preparation and delivery methods required for each type of experiment affect the crystal structure of the enzyme.
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spelling pubmed-70553752020-03-06 Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals Wolff, Alexander M. Young, Iris D. Sierra, Raymond G. Brewster, Aaron S. Martynowycz, Michael W. Nango, Eriko Sugahara, Michihiro Nakane, Takanori Ito, Kazutaka Aquila, Andrew Bhowmick, Asmit Biel, Justin T. Carbajo, Sergio Cohen, Aina E. Cortez, Saul Gonzalez, Ana Hino, Tomoya Im, Dohyun Koralek, Jake D. Kubo, Minoru Lazarou, Tomas S. Nomura, Takashi Owada, Shigeki Samelson, Avi J. Tanaka, Tomoyuki Tanaka, Rie Thompson, Erin M. van den Bedem, Henry Woldeyes, Rahel A. Yumoto, Fumiaki Zhao, Wei Tono, Kensuke Boutet, Sebastien Iwata, So Gonen, Tamir Sauter, Nicholas K. Fraser, James S. Thompson, Michael C. IUCrJ Research Papers Innovative new crystallographic methods are facilitating structural studies from ever smaller crystals of biological macromolecules. In particular, serial X-ray crystallography and microcrystal electron diffraction (MicroED) have emerged as useful methods for obtaining structural information from crystals on the nanometre to micrometre scale. Despite the utility of these methods, their implementation can often be difficult, as they present many challenges that are not encountered in traditional macromolecular crystallography experiments. Here, XFEL serial crystallography experiments and MicroED experiments using batch-grown microcrystals of the enzyme cyclophilin A are described. The results provide a roadmap for researchers hoping to design macromolecular microcrystallography experiments, and they highlight the strengths and weaknesses of the two methods. Specifically, we focus on how the different physical conditions imposed by the sample-preparation and delivery methods required for each type of experiment affect the crystal structure of the enzyme. International Union of Crystallography 2020-02-26 /pmc/articles/PMC7055375/ /pubmed/32148858 http://dx.doi.org/10.1107/S205225252000072X Text en © Alexander M. Wolff et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Wolff, Alexander M.
Young, Iris D.
Sierra, Raymond G.
Brewster, Aaron S.
Martynowycz, Michael W.
Nango, Eriko
Sugahara, Michihiro
Nakane, Takanori
Ito, Kazutaka
Aquila, Andrew
Bhowmick, Asmit
Biel, Justin T.
Carbajo, Sergio
Cohen, Aina E.
Cortez, Saul
Gonzalez, Ana
Hino, Tomoya
Im, Dohyun
Koralek, Jake D.
Kubo, Minoru
Lazarou, Tomas S.
Nomura, Takashi
Owada, Shigeki
Samelson, Avi J.
Tanaka, Tomoyuki
Tanaka, Rie
Thompson, Erin M.
van den Bedem, Henry
Woldeyes, Rahel A.
Yumoto, Fumiaki
Zhao, Wei
Tono, Kensuke
Boutet, Sebastien
Iwata, So
Gonen, Tamir
Sauter, Nicholas K.
Fraser, James S.
Thompson, Michael C.
Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
title Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
title_full Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
title_fullStr Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
title_full_unstemmed Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
title_short Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
title_sort comparing serial x-ray crystallography and microcrystal electron diffraction (microed) as methods for routine structure determination from small macromolecular crystals
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7055375/
https://www.ncbi.nlm.nih.gov/pubmed/32148858
http://dx.doi.org/10.1107/S205225252000072X
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