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Synthetic ablations in the C. elegans nervous system

Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscien...

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Detalles Bibliográficos
Autores principales: Towlson, Emma K., Barabási, Albert-László
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MIT Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7055645/
https://www.ncbi.nlm.nih.gov/pubmed/32166208
http://dx.doi.org/10.1162/netn_a_00115
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author Towlson, Emma K.
Barabási, Albert-László
author_facet Towlson, Emma K.
Barabási, Albert-László
author_sort Towlson, Emma K.
collection PubMed
description Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscience—a systematic knowledge base on the role of double or higher order ablations in the functioning of a neural system. Here, we use the framework of network control to systematically predict the effects of ablating neuron pairs and triplets on the gentle touch response. We find that surprisingly small sets of 58 pairs and 46 triplets can reduce muscle controllability in this context, and that these sets are localized in the nervous system in distinct groups. Further, they lead to highly specific experimentally testable predictions about mechanisms of loss of control, and which muscle cells are expected to experience this loss.
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spelling pubmed-70556452020-03-12 Synthetic ablations in the C. elegans nervous system Towlson, Emma K. Barabási, Albert-László Netw Neurosci Research Articles Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscience—a systematic knowledge base on the role of double or higher order ablations in the functioning of a neural system. Here, we use the framework of network control to systematically predict the effects of ablating neuron pairs and triplets on the gentle touch response. We find that surprisingly small sets of 58 pairs and 46 triplets can reduce muscle controllability in this context, and that these sets are localized in the nervous system in distinct groups. Further, they lead to highly specific experimentally testable predictions about mechanisms of loss of control, and which muscle cells are expected to experience this loss. MIT Press 2020-03-01 /pmc/articles/PMC7055645/ /pubmed/32166208 http://dx.doi.org/10.1162/netn_a_00115 Text en © 2019 Massachusetts Institute of Technology This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. For a full description of the license, please visit https://creativecommons.org/licenses/by/4.0/legalcode.
spellingShingle Research Articles
Towlson, Emma K.
Barabási, Albert-László
Synthetic ablations in the C. elegans nervous system
title Synthetic ablations in the C. elegans nervous system
title_full Synthetic ablations in the C. elegans nervous system
title_fullStr Synthetic ablations in the C. elegans nervous system
title_full_unstemmed Synthetic ablations in the C. elegans nervous system
title_short Synthetic ablations in the C. elegans nervous system
title_sort synthetic ablations in the c. elegans nervous system
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7055645/
https://www.ncbi.nlm.nih.gov/pubmed/32166208
http://dx.doi.org/10.1162/netn_a_00115
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