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Synthetic ablations in the C. elegans nervous system
Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscien...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MIT Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7055645/ https://www.ncbi.nlm.nih.gov/pubmed/32166208 http://dx.doi.org/10.1162/netn_a_00115 |
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author | Towlson, Emma K. Barabási, Albert-László |
author_facet | Towlson, Emma K. Barabási, Albert-László |
author_sort | Towlson, Emma K. |
collection | PubMed |
description | Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscience—a systematic knowledge base on the role of double or higher order ablations in the functioning of a neural system. Here, we use the framework of network control to systematically predict the effects of ablating neuron pairs and triplets on the gentle touch response. We find that surprisingly small sets of 58 pairs and 46 triplets can reduce muscle controllability in this context, and that these sets are localized in the nervous system in distinct groups. Further, they lead to highly specific experimentally testable predictions about mechanisms of loss of control, and which muscle cells are expected to experience this loss. |
format | Online Article Text |
id | pubmed-7055645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MIT Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-70556452020-03-12 Synthetic ablations in the C. elegans nervous system Towlson, Emma K. Barabási, Albert-László Netw Neurosci Research Articles Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscience—a systematic knowledge base on the role of double or higher order ablations in the functioning of a neural system. Here, we use the framework of network control to systematically predict the effects of ablating neuron pairs and triplets on the gentle touch response. We find that surprisingly small sets of 58 pairs and 46 triplets can reduce muscle controllability in this context, and that these sets are localized in the nervous system in distinct groups. Further, they lead to highly specific experimentally testable predictions about mechanisms of loss of control, and which muscle cells are expected to experience this loss. MIT Press 2020-03-01 /pmc/articles/PMC7055645/ /pubmed/32166208 http://dx.doi.org/10.1162/netn_a_00115 Text en © 2019 Massachusetts Institute of Technology This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. For a full description of the license, please visit https://creativecommons.org/licenses/by/4.0/legalcode. |
spellingShingle | Research Articles Towlson, Emma K. Barabási, Albert-László Synthetic ablations in the C. elegans nervous system |
title | Synthetic ablations in the C. elegans nervous system |
title_full | Synthetic ablations in the C. elegans nervous system |
title_fullStr | Synthetic ablations in the C. elegans nervous system |
title_full_unstemmed | Synthetic ablations in the C. elegans nervous system |
title_short | Synthetic ablations in the C. elegans nervous system |
title_sort | synthetic ablations in the c. elegans nervous system |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7055645/ https://www.ncbi.nlm.nih.gov/pubmed/32166208 http://dx.doi.org/10.1162/netn_a_00115 |
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