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Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing

BACKGROUND: Waardenburg syndrome (WS) is a dominantly inherited, genetically heterogeneous auditory‐pigmentary syndrome characterized by nonprogressive sensorineural hearing loss and iris discoloration. This study aimed to investigate the underlying molecular pathology in Chinese WS families. METHOD...

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Autores principales: Ren, Shumin, Chen, Xiaojie, Kong, Xiangdong, Chen, Yibing, Wu, Qinghua, Jiao, Zhihui, Shi, Huirong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7057110/
https://www.ncbi.nlm.nih.gov/pubmed/31960627
http://dx.doi.org/10.1002/mgg3.1128
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author Ren, Shumin
Chen, Xiaojie
Kong, Xiangdong
Chen, Yibing
Wu, Qinghua
Jiao, Zhihui
Shi, Huirong
author_facet Ren, Shumin
Chen, Xiaojie
Kong, Xiangdong
Chen, Yibing
Wu, Qinghua
Jiao, Zhihui
Shi, Huirong
author_sort Ren, Shumin
collection PubMed
description BACKGROUND: Waardenburg syndrome (WS) is a dominantly inherited, genetically heterogeneous auditory‐pigmentary syndrome characterized by nonprogressive sensorineural hearing loss and iris discoloration. This study aimed to investigate the underlying molecular pathology in Chinese WS families. METHODS: A total of 13 patients with Waardenburg syndrome type II (WS2) from six unrelated Chinese families were enrolled. We investigated the mutation profile of genes related to congenital deafness in these families through a targeted sequencing technology and validated the candidate variants by Sanger sequencing. RESULTS: We identified six novel variants in microphthalmia‐associated transcription factor (MITF) and SRY‐box 10 (SOX10), which were predicted to be disease causing by in silico analysis. Our results showed that mutations in SOX10 and MITF are two major causes of deafness associated with WS, and de novo mutations were frequently found in probands with SOX10 mutations but not in those with MITF mutations. CONCLUSION: Results showed that targeted next‐generation sequencing (NGS) enabled us to detect disease‐causing mutations with high accuracy, stability, speed and throughput. Our study extends the pathogenic mutation spectrum of MITF and SOX10.
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spelling pubmed-70571102020-03-12 Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing Ren, Shumin Chen, Xiaojie Kong, Xiangdong Chen, Yibing Wu, Qinghua Jiao, Zhihui Shi, Huirong Mol Genet Genomic Med Original Articles BACKGROUND: Waardenburg syndrome (WS) is a dominantly inherited, genetically heterogeneous auditory‐pigmentary syndrome characterized by nonprogressive sensorineural hearing loss and iris discoloration. This study aimed to investigate the underlying molecular pathology in Chinese WS families. METHODS: A total of 13 patients with Waardenburg syndrome type II (WS2) from six unrelated Chinese families were enrolled. We investigated the mutation profile of genes related to congenital deafness in these families through a targeted sequencing technology and validated the candidate variants by Sanger sequencing. RESULTS: We identified six novel variants in microphthalmia‐associated transcription factor (MITF) and SRY‐box 10 (SOX10), which were predicted to be disease causing by in silico analysis. Our results showed that mutations in SOX10 and MITF are two major causes of deafness associated with WS, and de novo mutations were frequently found in probands with SOX10 mutations but not in those with MITF mutations. CONCLUSION: Results showed that targeted next‐generation sequencing (NGS) enabled us to detect disease‐causing mutations with high accuracy, stability, speed and throughput. Our study extends the pathogenic mutation spectrum of MITF and SOX10. John Wiley and Sons Inc. 2020-01-20 /pmc/articles/PMC7057110/ /pubmed/31960627 http://dx.doi.org/10.1002/mgg3.1128 Text en © 2020 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Ren, Shumin
Chen, Xiaojie
Kong, Xiangdong
Chen, Yibing
Wu, Qinghua
Jiao, Zhihui
Shi, Huirong
Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing
title Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing
title_full Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing
title_fullStr Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing
title_full_unstemmed Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing
title_short Identification of six novel variants in Waardenburg syndrome type II by next‐generation sequencing
title_sort identification of six novel variants in waardenburg syndrome type ii by next‐generation sequencing
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7057110/
https://www.ncbi.nlm.nih.gov/pubmed/31960627
http://dx.doi.org/10.1002/mgg3.1128
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