Cargando…
Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation
The genomic inter-individual heterogeneity remains a significant challenge for both clinical decision-making and the design of clinical trials. Although next-generation sequencing (NGS) is increasingly implemented in drug development and clinical trials, translation of the obtained genomic informati...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7057970/ https://www.ncbi.nlm.nih.gov/pubmed/32194983 http://dx.doi.org/10.1038/s41525-020-0119-2 |
_version_ | 1783503773582229504 |
---|---|
author | Lauschke, Volker M. Ingelman-Sundberg, Magnus |
author_facet | Lauschke, Volker M. Ingelman-Sundberg, Magnus |
author_sort | Lauschke, Volker M. |
collection | PubMed |
description | The genomic inter-individual heterogeneity remains a significant challenge for both clinical decision-making and the design of clinical trials. Although next-generation sequencing (NGS) is increasingly implemented in drug development and clinical trials, translation of the obtained genomic information into actionable clinical advice lags behind. Major reasons are the paucity of sufficiently powered trials that can quantify the added value of pharmacogenetic testing, and the considerable pharmacogenetic complexity with millions of rare variants with unclear functional consequences. The resulting uncertainty is reflected in inconsistencies of pharmacogenomic drug labels in Europe and the United States. In this review, we discuss how the knowledge gap for bridging pharmacogenomics into the clinics can be reduced. First, emerging methods that allow the high-throughput experimental characterization of pharmacogenomic variants combined with novel computational tools hold promise to improve the accuracy of drug response predictions. Second, tapping of large biobanks of therapeutic drug monitoring data allows to conduct high-powered retrospective studies that can validate the clinical importance of genetic variants, which are currently incompletely characterized. Combined, we are confident that these methods will improve the accuracy of drug response predictions and will narrow the gap between variant identification and its utilization for clinical decision-support. |
format | Online Article Text |
id | pubmed-7057970 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70579702020-03-19 Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation Lauschke, Volker M. Ingelman-Sundberg, Magnus NPJ Genom Med Review Article The genomic inter-individual heterogeneity remains a significant challenge for both clinical decision-making and the design of clinical trials. Although next-generation sequencing (NGS) is increasingly implemented in drug development and clinical trials, translation of the obtained genomic information into actionable clinical advice lags behind. Major reasons are the paucity of sufficiently powered trials that can quantify the added value of pharmacogenetic testing, and the considerable pharmacogenetic complexity with millions of rare variants with unclear functional consequences. The resulting uncertainty is reflected in inconsistencies of pharmacogenomic drug labels in Europe and the United States. In this review, we discuss how the knowledge gap for bridging pharmacogenomics into the clinics can be reduced. First, emerging methods that allow the high-throughput experimental characterization of pharmacogenomic variants combined with novel computational tools hold promise to improve the accuracy of drug response predictions. Second, tapping of large biobanks of therapeutic drug monitoring data allows to conduct high-powered retrospective studies that can validate the clinical importance of genetic variants, which are currently incompletely characterized. Combined, we are confident that these methods will improve the accuracy of drug response predictions and will narrow the gap between variant identification and its utilization for clinical decision-support. Nature Publishing Group UK 2020-03-05 /pmc/articles/PMC7057970/ /pubmed/32194983 http://dx.doi.org/10.1038/s41525-020-0119-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Review Article Lauschke, Volker M. Ingelman-Sundberg, Magnus Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
title | Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
title_full | Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
title_fullStr | Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
title_full_unstemmed | Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
title_short | Emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
title_sort | emerging strategies to bridge the gap between pharmacogenomic research and its clinical implementation |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7057970/ https://www.ncbi.nlm.nih.gov/pubmed/32194983 http://dx.doi.org/10.1038/s41525-020-0119-2 |
work_keys_str_mv | AT lauschkevolkerm emergingstrategiestobridgethegapbetweenpharmacogenomicresearchanditsclinicalimplementation AT ingelmansundbergmagnus emergingstrategiestobridgethegapbetweenpharmacogenomicresearchanditsclinicalimplementation |