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Temporal changes in the gene expression heterogeneity during brain development and aging
Cells in largely non-mitotic tissues such as the brain are prone to stochastic (epi-)genetic alterations that may cause increased variability between cells and individuals over time. Although increased inter-individual heterogeneity in gene expression was previously reported, whether this process st...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058021/ https://www.ncbi.nlm.nih.gov/pubmed/32139741 http://dx.doi.org/10.1038/s41598-020-60998-0 |
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author | Işıldak, Ulaş Somel, Mehmet Thornton, Janet M. Dönertaş, Handan Melike |
author_facet | Işıldak, Ulaş Somel, Mehmet Thornton, Janet M. Dönertaş, Handan Melike |
author_sort | Işıldak, Ulaş |
collection | PubMed |
description | Cells in largely non-mitotic tissues such as the brain are prone to stochastic (epi-)genetic alterations that may cause increased variability between cells and individuals over time. Although increased inter-individual heterogeneity in gene expression was previously reported, whether this process starts during development or if it is restricted to the aging period has not yet been studied. The regulatory dynamics and functional significance of putative aging-related heterogeneity are also unknown. Here we address these by a meta-analysis of 19 transcriptome datasets from three independent studies, covering diverse human brain regions. We observed a significant increase in inter-individual heterogeneity during aging (20 + years) compared to postnatal development (0 to 20 years). Increased heterogeneity during aging was consistent among different brain regions at the gene level and associated with lifespan regulation and neuronal functions. Overall, our results show that increased expression heterogeneity is a characteristic of aging human brain, and may influence aging-related changes in brain functions. |
format | Online Article Text |
id | pubmed-7058021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70580212020-03-12 Temporal changes in the gene expression heterogeneity during brain development and aging Işıldak, Ulaş Somel, Mehmet Thornton, Janet M. Dönertaş, Handan Melike Sci Rep Article Cells in largely non-mitotic tissues such as the brain are prone to stochastic (epi-)genetic alterations that may cause increased variability between cells and individuals over time. Although increased inter-individual heterogeneity in gene expression was previously reported, whether this process starts during development or if it is restricted to the aging period has not yet been studied. The regulatory dynamics and functional significance of putative aging-related heterogeneity are also unknown. Here we address these by a meta-analysis of 19 transcriptome datasets from three independent studies, covering diverse human brain regions. We observed a significant increase in inter-individual heterogeneity during aging (20 + years) compared to postnatal development (0 to 20 years). Increased heterogeneity during aging was consistent among different brain regions at the gene level and associated with lifespan regulation and neuronal functions. Overall, our results show that increased expression heterogeneity is a characteristic of aging human brain, and may influence aging-related changes in brain functions. Nature Publishing Group UK 2020-03-05 /pmc/articles/PMC7058021/ /pubmed/32139741 http://dx.doi.org/10.1038/s41598-020-60998-0 Text en © The Author(s) 2020, corrected publication 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Işıldak, Ulaş Somel, Mehmet Thornton, Janet M. Dönertaş, Handan Melike Temporal changes in the gene expression heterogeneity during brain development and aging |
title | Temporal changes in the gene expression heterogeneity during brain development and aging |
title_full | Temporal changes in the gene expression heterogeneity during brain development and aging |
title_fullStr | Temporal changes in the gene expression heterogeneity during brain development and aging |
title_full_unstemmed | Temporal changes in the gene expression heterogeneity during brain development and aging |
title_short | Temporal changes in the gene expression heterogeneity during brain development and aging |
title_sort | temporal changes in the gene expression heterogeneity during brain development and aging |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058021/ https://www.ncbi.nlm.nih.gov/pubmed/32139741 http://dx.doi.org/10.1038/s41598-020-60998-0 |
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