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Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot
Susceptibility to root-knot nematodes (Meloidogyne spp.) is one of the major factors limiting mungbean production in South and South-East Asia. Host-pest-environment interaction in mungbean and root-knot nematode (M. incognita) was investigated in multi-location field evaluation using 38 promising m...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058080/ https://www.ncbi.nlm.nih.gov/pubmed/32139771 http://dx.doi.org/10.1038/s41598-020-60820-x |
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author | Singh, Bansa Das, Arpita Parihar, A. K. Bhagawati, B. Singh, Deepak Pathak, K. N. Dwivedi, Kusum Das, Niranjan Keshari, Nishi Midha, R. L. Kumar, Raju Pratap, Aditya Kumar, Vaibhav Gupta, Sanjeev |
author_facet | Singh, Bansa Das, Arpita Parihar, A. K. Bhagawati, B. Singh, Deepak Pathak, K. N. Dwivedi, Kusum Das, Niranjan Keshari, Nishi Midha, R. L. Kumar, Raju Pratap, Aditya Kumar, Vaibhav Gupta, Sanjeev |
author_sort | Singh, Bansa |
collection | PubMed |
description | Susceptibility to root-knot nematodes (Meloidogyne spp.) is one of the major factors limiting mungbean production in South and South-East Asia. Host-pest-environment interaction in mungbean and root-knot nematode (M. incognita) was investigated in multi-location field evaluation using 38 promising mungbean genotypes extracted from initial evaluation of 250 genotypes under sick plots considering second stage freshly hatched juvenile as inoculants. The extent of environmental and genotype-by-environment interactions (GGE) was assessed to comprehend the dynamism of resistance and identification of durable resistant mungbean genotypes. Among environmental factors, nematode activity was highly influenced by rainfall and minimum temperature. The GGE biplot and multiple comparison tests detected a higher proportion of genotype × environment (GE) interaction followed by genotype and environment on number of nematode galls, gall index and reproduction factor. The first two principal components (PCs) explained 64.33% and 66.99% of the total variation of the environment-centered gall scoring and reproduction factor data, respectively. The high GE variation indicated the presence of non-cross over interactions which justify the necessities of multi-location testing. Detection of non-redundant testing locations would expedite optimum resource utilization in future. The GGE biplot analysis identified genotypes such as PM-10-12, IPM-410-3 and NVL-641 as the outperforming and desirable genotypes with durable resistance against M. incognita which can be exploited in mungbean breeding programmes globally. On the contrary, the highest gall scoring and reproduction factor were recorded in genotype IPM-9901-8. Computation of confidence interval (CI) at 95% level through bootstrapping increased precision of GGE biplot towards genotype recommendation. Furthermore, total phenol content, ascorbic acid, phenlylalanine ammonia lyase (PAL) and polyphenol oxidase (PPO) activities were also higher in identified resistant genotypes and this information would be useful for devising mungbean breeding strategies in future for resistance against root-knot nematodes. |
format | Online Article Text |
id | pubmed-7058080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70580802020-03-12 Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot Singh, Bansa Das, Arpita Parihar, A. K. Bhagawati, B. Singh, Deepak Pathak, K. N. Dwivedi, Kusum Das, Niranjan Keshari, Nishi Midha, R. L. Kumar, Raju Pratap, Aditya Kumar, Vaibhav Gupta, Sanjeev Sci Rep Article Susceptibility to root-knot nematodes (Meloidogyne spp.) is one of the major factors limiting mungbean production in South and South-East Asia. Host-pest-environment interaction in mungbean and root-knot nematode (M. incognita) was investigated in multi-location field evaluation using 38 promising mungbean genotypes extracted from initial evaluation of 250 genotypes under sick plots considering second stage freshly hatched juvenile as inoculants. The extent of environmental and genotype-by-environment interactions (GGE) was assessed to comprehend the dynamism of resistance and identification of durable resistant mungbean genotypes. Among environmental factors, nematode activity was highly influenced by rainfall and minimum temperature. The GGE biplot and multiple comparison tests detected a higher proportion of genotype × environment (GE) interaction followed by genotype and environment on number of nematode galls, gall index and reproduction factor. The first two principal components (PCs) explained 64.33% and 66.99% of the total variation of the environment-centered gall scoring and reproduction factor data, respectively. The high GE variation indicated the presence of non-cross over interactions which justify the necessities of multi-location testing. Detection of non-redundant testing locations would expedite optimum resource utilization in future. The GGE biplot analysis identified genotypes such as PM-10-12, IPM-410-3 and NVL-641 as the outperforming and desirable genotypes with durable resistance against M. incognita which can be exploited in mungbean breeding programmes globally. On the contrary, the highest gall scoring and reproduction factor were recorded in genotype IPM-9901-8. Computation of confidence interval (CI) at 95% level through bootstrapping increased precision of GGE biplot towards genotype recommendation. Furthermore, total phenol content, ascorbic acid, phenlylalanine ammonia lyase (PAL) and polyphenol oxidase (PPO) activities were also higher in identified resistant genotypes and this information would be useful for devising mungbean breeding strategies in future for resistance against root-knot nematodes. Nature Publishing Group UK 2020-03-05 /pmc/articles/PMC7058080/ /pubmed/32139771 http://dx.doi.org/10.1038/s41598-020-60820-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons License, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons License, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons License and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this License, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Singh, Bansa Das, Arpita Parihar, A. K. Bhagawati, B. Singh, Deepak Pathak, K. N. Dwivedi, Kusum Das, Niranjan Keshari, Nishi Midha, R. L. Kumar, Raju Pratap, Aditya Kumar, Vaibhav Gupta, Sanjeev Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot |
title | Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot |
title_full | Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot |
title_fullStr | Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot |
title_full_unstemmed | Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot |
title_short | Delineation of Genotype-by-Environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (Meloidogyne incognita) using GGE biplot |
title_sort | delineation of genotype-by-environment interactions for identification and validation of resistant genotypes in mungbean to root-knot nematode (meloidogyne incognita) using gge biplot |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058080/ https://www.ncbi.nlm.nih.gov/pubmed/32139771 http://dx.doi.org/10.1038/s41598-020-60820-x |
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