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Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma
Managing low-grade gliomas (LGG) remains a major medical challenge due to the infiltrating nature of the tumor and failure of surgical resection to eliminate the disease. EMILIN/Multimerins contain the gC1q signature, which is involved in many tumor processes. However, the expression and prognostic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058105/ https://www.ncbi.nlm.nih.gov/pubmed/32175193 http://dx.doi.org/10.7717/peerj.8696 |
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author | Zhao, Yonghui Zhang, Xiang Yao, Junchao Jin, Zhibin Liu, Chen |
author_facet | Zhao, Yonghui Zhang, Xiang Yao, Junchao Jin, Zhibin Liu, Chen |
author_sort | Zhao, Yonghui |
collection | PubMed |
description | Managing low-grade gliomas (LGG) remains a major medical challenge due to the infiltrating nature of the tumor and failure of surgical resection to eliminate the disease. EMILIN/Multimerins contain the gC1q signature, which is involved in many tumor processes. However, the expression and prognostic value of EMILIN/Multimerins in LGG remains unclear. This study used integrated bioinformatics analysis to investigate the expression pattern, prognostic value and function of EMILIN/Multimerins in patients with LGG. We analyzed the transcription levels and prognostic value EMILIN/Multimerins in LGG using the ONCOMINE, Gene Expression Profiling Interactive Analysis (GEPIA) and UALCAN databases. The mutation and co-expression rates of neighboring genes in EMILIN/Multimerins were studied using cBioPortal. TIMER and Metascape were used to reveal the potential function of EMILIN/Multimerins in LGG. According to our analysis, most EMILIN/Multimerins were overexpressed in LGG and shared a clear association with immune cells. GEPIA analysis confirmed that high levels of EMILIN/Multimerins, not including MMRN2, were associated with a poor prognosis in disease-free survival of patients with LGG. Additionally, we discovered that EMILIN/Multimerins may regulate LGG and we found a correlation between their expression patterns and distinct pathological grades. We found that EMILIN/Multimerins serve as possible prognostic biomarkers and high-priority therapeutic targets patients with LGG. |
format | Online Article Text |
id | pubmed-7058105 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70581052020-03-13 Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma Zhao, Yonghui Zhang, Xiang Yao, Junchao Jin, Zhibin Liu, Chen PeerJ Bioinformatics Managing low-grade gliomas (LGG) remains a major medical challenge due to the infiltrating nature of the tumor and failure of surgical resection to eliminate the disease. EMILIN/Multimerins contain the gC1q signature, which is involved in many tumor processes. However, the expression and prognostic value of EMILIN/Multimerins in LGG remains unclear. This study used integrated bioinformatics analysis to investigate the expression pattern, prognostic value and function of EMILIN/Multimerins in patients with LGG. We analyzed the transcription levels and prognostic value EMILIN/Multimerins in LGG using the ONCOMINE, Gene Expression Profiling Interactive Analysis (GEPIA) and UALCAN databases. The mutation and co-expression rates of neighboring genes in EMILIN/Multimerins were studied using cBioPortal. TIMER and Metascape were used to reveal the potential function of EMILIN/Multimerins in LGG. According to our analysis, most EMILIN/Multimerins were overexpressed in LGG and shared a clear association with immune cells. GEPIA analysis confirmed that high levels of EMILIN/Multimerins, not including MMRN2, were associated with a poor prognosis in disease-free survival of patients with LGG. Additionally, we discovered that EMILIN/Multimerins may regulate LGG and we found a correlation between their expression patterns and distinct pathological grades. We found that EMILIN/Multimerins serve as possible prognostic biomarkers and high-priority therapeutic targets patients with LGG. PeerJ Inc. 2020-03-02 /pmc/articles/PMC7058105/ /pubmed/32175193 http://dx.doi.org/10.7717/peerj.8696 Text en © 2020 Zhao et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Zhao, Yonghui Zhang, Xiang Yao, Junchao Jin, Zhibin Liu, Chen Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma |
title | Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma |
title_full | Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma |
title_fullStr | Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma |
title_full_unstemmed | Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma |
title_short | Expression patterns and the prognostic value of the EMILIN/Multimerin family members in low-grade glioma |
title_sort | expression patterns and the prognostic value of the emilin/multimerin family members in low-grade glioma |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058105/ https://www.ncbi.nlm.nih.gov/pubmed/32175193 http://dx.doi.org/10.7717/peerj.8696 |
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