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Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
Melon necrotic spot virus (MNSV) can cause significant economic losses due to decreased quality in cucurbit crops. The current study is the first to use reverse transcription loop-mediated isothermal amplification (RT-LAMP) for detection of MNSV. A set of four LAMP primers was designed based on the...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058275/ https://www.ncbi.nlm.nih.gov/pubmed/32134962 http://dx.doi.org/10.1371/journal.pone.0230023 |
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author | Qiao, Ning Dai, Huijie Liu, Jie Zhu, Xiaoping Li, Jintang Zhang, Dezhen Liu, Yongguang |
author_facet | Qiao, Ning Dai, Huijie Liu, Jie Zhu, Xiaoping Li, Jintang Zhang, Dezhen Liu, Yongguang |
author_sort | Qiao, Ning |
collection | PubMed |
description | Melon necrotic spot virus (MNSV) can cause significant economic losses due to decreased quality in cucurbit crops. The current study is the first to use reverse transcription loop-mediated isothermal amplification (RT-LAMP) for detection of MNSV. A set of four LAMP primers was designed based on the coat protein gene sequence of MNSV, and a RT-LAMP reaction was successfully performed for 1 h at 62°C. The results of RT-LAMP showed high specificity for MNSV and no cross-reaction with other viruses. Compared to traditional reverse transcription-PCR (RT-PCR), the RT-LAMP assay was 10(3)-fold more sensitive in detecting MNSV. Due to its sensitivity, speed and visual assessment, RT-LAMP is appropriate for detecting MNSV in the laboratory. |
format | Online Article Text |
id | pubmed-7058275 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-70582752020-03-13 Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay Qiao, Ning Dai, Huijie Liu, Jie Zhu, Xiaoping Li, Jintang Zhang, Dezhen Liu, Yongguang PLoS One Research Article Melon necrotic spot virus (MNSV) can cause significant economic losses due to decreased quality in cucurbit crops. The current study is the first to use reverse transcription loop-mediated isothermal amplification (RT-LAMP) for detection of MNSV. A set of four LAMP primers was designed based on the coat protein gene sequence of MNSV, and a RT-LAMP reaction was successfully performed for 1 h at 62°C. The results of RT-LAMP showed high specificity for MNSV and no cross-reaction with other viruses. Compared to traditional reverse transcription-PCR (RT-PCR), the RT-LAMP assay was 10(3)-fold more sensitive in detecting MNSV. Due to its sensitivity, speed and visual assessment, RT-LAMP is appropriate for detecting MNSV in the laboratory. Public Library of Science 2020-03-05 /pmc/articles/PMC7058275/ /pubmed/32134962 http://dx.doi.org/10.1371/journal.pone.0230023 Text en © 2020 Qiao et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Qiao, Ning Dai, Huijie Liu, Jie Zhu, Xiaoping Li, Jintang Zhang, Dezhen Liu, Yongguang Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
title | Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
title_full | Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
title_fullStr | Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
title_full_unstemmed | Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
title_short | Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
title_sort | detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058275/ https://www.ncbi.nlm.nih.gov/pubmed/32134962 http://dx.doi.org/10.1371/journal.pone.0230023 |
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