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Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay

Melon necrotic spot virus (MNSV) can cause significant economic losses due to decreased quality in cucurbit crops. The current study is the first to use reverse transcription loop-mediated isothermal amplification (RT-LAMP) for detection of MNSV. A set of four LAMP primers was designed based on the...

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Detalles Bibliográficos
Autores principales: Qiao, Ning, Dai, Huijie, Liu, Jie, Zhu, Xiaoping, Li, Jintang, Zhang, Dezhen, Liu, Yongguang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058275/
https://www.ncbi.nlm.nih.gov/pubmed/32134962
http://dx.doi.org/10.1371/journal.pone.0230023
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author Qiao, Ning
Dai, Huijie
Liu, Jie
Zhu, Xiaoping
Li, Jintang
Zhang, Dezhen
Liu, Yongguang
author_facet Qiao, Ning
Dai, Huijie
Liu, Jie
Zhu, Xiaoping
Li, Jintang
Zhang, Dezhen
Liu, Yongguang
author_sort Qiao, Ning
collection PubMed
description Melon necrotic spot virus (MNSV) can cause significant economic losses due to decreased quality in cucurbit crops. The current study is the first to use reverse transcription loop-mediated isothermal amplification (RT-LAMP) for detection of MNSV. A set of four LAMP primers was designed based on the coat protein gene sequence of MNSV, and a RT-LAMP reaction was successfully performed for 1 h at 62°C. The results of RT-LAMP showed high specificity for MNSV and no cross-reaction with other viruses. Compared to traditional reverse transcription-PCR (RT-PCR), the RT-LAMP assay was 10(3)-fold more sensitive in detecting MNSV. Due to its sensitivity, speed and visual assessment, RT-LAMP is appropriate for detecting MNSV in the laboratory.
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spelling pubmed-70582752020-03-13 Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay Qiao, Ning Dai, Huijie Liu, Jie Zhu, Xiaoping Li, Jintang Zhang, Dezhen Liu, Yongguang PLoS One Research Article Melon necrotic spot virus (MNSV) can cause significant economic losses due to decreased quality in cucurbit crops. The current study is the first to use reverse transcription loop-mediated isothermal amplification (RT-LAMP) for detection of MNSV. A set of four LAMP primers was designed based on the coat protein gene sequence of MNSV, and a RT-LAMP reaction was successfully performed for 1 h at 62°C. The results of RT-LAMP showed high specificity for MNSV and no cross-reaction with other viruses. Compared to traditional reverse transcription-PCR (RT-PCR), the RT-LAMP assay was 10(3)-fold more sensitive in detecting MNSV. Due to its sensitivity, speed and visual assessment, RT-LAMP is appropriate for detecting MNSV in the laboratory. Public Library of Science 2020-03-05 /pmc/articles/PMC7058275/ /pubmed/32134962 http://dx.doi.org/10.1371/journal.pone.0230023 Text en © 2020 Qiao et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Qiao, Ning
Dai, Huijie
Liu, Jie
Zhu, Xiaoping
Li, Jintang
Zhang, Dezhen
Liu, Yongguang
Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
title Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
title_full Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
title_fullStr Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
title_full_unstemmed Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
title_short Detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
title_sort detection of melon necrotic spot virus by one-step reverse transcription loop-mediated isothermal amplification assay
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058275/
https://www.ncbi.nlm.nih.gov/pubmed/32134962
http://dx.doi.org/10.1371/journal.pone.0230023
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