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An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1
Peroxisome proliferator-activated receptor γ (PPARγ) is a master regulator of adipogenesis. The PPARγ gene produces various transcripts with different 5′-untranslated regions (5′ UTRs) because of alternative promoter usage and splicing. The 5′ UTR plays important roles in posttranscriptional gene re...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058706/ https://www.ncbi.nlm.nih.gov/pubmed/32184808 http://dx.doi.org/10.3389/fgene.2020.00165 |
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author | Chu, Yankai Huang, Jiaxin Ma, Guangwei Cui, Tingting Yan, Xiaohong Li, Hui Wang, Ning |
author_facet | Chu, Yankai Huang, Jiaxin Ma, Guangwei Cui, Tingting Yan, Xiaohong Li, Hui Wang, Ning |
author_sort | Chu, Yankai |
collection | PubMed |
description | Peroxisome proliferator-activated receptor γ (PPARγ) is a master regulator of adipogenesis. The PPARγ gene produces various transcripts with different 5′-untranslated regions (5′ UTRs) because of alternative promoter usage and splicing. The 5′ UTR plays important roles in posttranscriptional gene regulation. However, to date, the regulatory role and underlying mechanism of 5′ UTRs in the posttranscriptional regulation of PPARγ expression remain largely unclear. In this study, we investigated the effects of 5′ UTRs on posttranscriptional regulation using reporter assays. Our results showed that the five PPARγ 5′ UTRs exerted different effects on reporter gene activity. Bioinformatics analysis showed that chicken PPARγ transcript 1 (PPARγ1) possessed an upstream open reading frame (uORF) in its 5′ UTR. Mutation analysis showed that a mutation in the uORF led to increased Renilla luciferase activity and PPARγ protein expression, but decreased Renilla luciferase and PPARγ1 mRNA expression. mRNA stability analysis using real-time RT-PCR showed that the uORF mutation did not interfere with mRNA stability, but promoter activity analysis of the cloned 5′ UTR showed that the uORF mutation reduced promoter activity. Furthermore, in vitro transcription/translation assays demonstrated that the uORF mutation markedly increased the translation of PPARγ1 mRNA. Collectively, our results indicate that the uORF represses the translation of chicken PPARγ1 mRNA. |
format | Online Article Text |
id | pubmed-7058706 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70587062020-03-17 An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 Chu, Yankai Huang, Jiaxin Ma, Guangwei Cui, Tingting Yan, Xiaohong Li, Hui Wang, Ning Front Genet Genetics Peroxisome proliferator-activated receptor γ (PPARγ) is a master regulator of adipogenesis. The PPARγ gene produces various transcripts with different 5′-untranslated regions (5′ UTRs) because of alternative promoter usage and splicing. The 5′ UTR plays important roles in posttranscriptional gene regulation. However, to date, the regulatory role and underlying mechanism of 5′ UTRs in the posttranscriptional regulation of PPARγ expression remain largely unclear. In this study, we investigated the effects of 5′ UTRs on posttranscriptional regulation using reporter assays. Our results showed that the five PPARγ 5′ UTRs exerted different effects on reporter gene activity. Bioinformatics analysis showed that chicken PPARγ transcript 1 (PPARγ1) possessed an upstream open reading frame (uORF) in its 5′ UTR. Mutation analysis showed that a mutation in the uORF led to increased Renilla luciferase activity and PPARγ protein expression, but decreased Renilla luciferase and PPARγ1 mRNA expression. mRNA stability analysis using real-time RT-PCR showed that the uORF mutation did not interfere with mRNA stability, but promoter activity analysis of the cloned 5′ UTR showed that the uORF mutation reduced promoter activity. Furthermore, in vitro transcription/translation assays demonstrated that the uORF mutation markedly increased the translation of PPARγ1 mRNA. Collectively, our results indicate that the uORF represses the translation of chicken PPARγ1 mRNA. Frontiers Media S.A. 2020-02-28 /pmc/articles/PMC7058706/ /pubmed/32184808 http://dx.doi.org/10.3389/fgene.2020.00165 Text en Copyright © 2020 Chu, Huang, Ma, Cui, Yan, Li and Wang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Chu, Yankai Huang, Jiaxin Ma, Guangwei Cui, Tingting Yan, Xiaohong Li, Hui Wang, Ning An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 |
title | An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 |
title_full | An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 |
title_fullStr | An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 |
title_full_unstemmed | An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 |
title_short | An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1 |
title_sort | upstream open reading frame represses translation of chicken pparγ transcript variant 1 |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7058706/ https://www.ncbi.nlm.nih.gov/pubmed/32184808 http://dx.doi.org/10.3389/fgene.2020.00165 |
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