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Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods

Molecular crystal structure prediction is increasingly being applied to study the solid form landscapes of larger, more flexible pharmaceutical molecules. Despite many successes in crystal structure prediction, van der Waals-inclusive density functional theory (DFT) methods exhibit serious failures...

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Autores principales: Greenwell, Chandler, McKinley, Jessica L., Zhang, Peiyu, Zeng, Qun, Sun, Guangxu, Li, Bochen, Wen, Shuhao, Beran, Gregory J. O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7059316/
https://www.ncbi.nlm.nih.gov/pubmed/32190277
http://dx.doi.org/10.1039/c9sc05689k
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author Greenwell, Chandler
McKinley, Jessica L.
Zhang, Peiyu
Zeng, Qun
Sun, Guangxu
Li, Bochen
Wen, Shuhao
Beran, Gregory J. O.
author_facet Greenwell, Chandler
McKinley, Jessica L.
Zhang, Peiyu
Zeng, Qun
Sun, Guangxu
Li, Bochen
Wen, Shuhao
Beran, Gregory J. O.
author_sort Greenwell, Chandler
collection PubMed
description Molecular crystal structure prediction is increasingly being applied to study the solid form landscapes of larger, more flexible pharmaceutical molecules. Despite many successes in crystal structure prediction, van der Waals-inclusive density functional theory (DFT) methods exhibit serious failures predicting the polymorph stabilities for a number of systems exhibiting conformational polymorphism, where changes in intramolecular conformation lead to different intermolecular crystal packings. Here, the stabilities of the conformational polymorphs of o-acetamidobenzamide, ROY, and oxalyl dihydrazide are examined in detail. DFT functionals that have previously been very successful in crystal structure prediction perform poorly in all three systems, due primarily to the poor intramolecular conformational energies, but also due to the intermolecular description in oxalyl dihydrazide. In all three cases, a fragment-based dispersion-corrected second-order Møller–Plesset perturbation theory (MP2D) treatment of the crystals overcomes these difficulties and predicts conformational polymorph stabilities in good agreement with experiment. These results highlight the need for methods which go beyond current-generation DFT functionals to make crystal polymorph stability predictions truly reliable.
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spelling pubmed-70593162020-03-18 Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods Greenwell, Chandler McKinley, Jessica L. Zhang, Peiyu Zeng, Qun Sun, Guangxu Li, Bochen Wen, Shuhao Beran, Gregory J. O. Chem Sci Chemistry Molecular crystal structure prediction is increasingly being applied to study the solid form landscapes of larger, more flexible pharmaceutical molecules. Despite many successes in crystal structure prediction, van der Waals-inclusive density functional theory (DFT) methods exhibit serious failures predicting the polymorph stabilities for a number of systems exhibiting conformational polymorphism, where changes in intramolecular conformation lead to different intermolecular crystal packings. Here, the stabilities of the conformational polymorphs of o-acetamidobenzamide, ROY, and oxalyl dihydrazide are examined in detail. DFT functionals that have previously been very successful in crystal structure prediction perform poorly in all three systems, due primarily to the poor intramolecular conformational energies, but also due to the intermolecular description in oxalyl dihydrazide. In all three cases, a fragment-based dispersion-corrected second-order Møller–Plesset perturbation theory (MP2D) treatment of the crystals overcomes these difficulties and predicts conformational polymorph stabilities in good agreement with experiment. These results highlight the need for methods which go beyond current-generation DFT functionals to make crystal polymorph stability predictions truly reliable. Royal Society of Chemistry 2020-01-14 /pmc/articles/PMC7059316/ /pubmed/32190277 http://dx.doi.org/10.1039/c9sc05689k Text en This journal is © The Royal Society of Chemistry 2020 http://creativecommons.org/licenses/by/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence (CC BY 3.0)
spellingShingle Chemistry
Greenwell, Chandler
McKinley, Jessica L.
Zhang, Peiyu
Zeng, Qun
Sun, Guangxu
Li, Bochen
Wen, Shuhao
Beran, Gregory J. O.
Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
title Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
title_full Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
title_fullStr Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
title_full_unstemmed Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
title_short Overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
title_sort overcoming the difficulties of predicting conformational polymorph energetics in molecular crystals via correlated wavefunction methods
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7059316/
https://www.ncbi.nlm.nih.gov/pubmed/32190277
http://dx.doi.org/10.1039/c9sc05689k
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