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Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields
BACKGROUND: Convolvulus sepium (hedge bindweed) detection in sugar beet fields remains a challenging problem due to variation in appearance of plants, illumination changes, foliage occlusions, and different growth stages under field conditions. Current approaches for weed and crop recognition, segme...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7059384/ https://www.ncbi.nlm.nih.gov/pubmed/32165909 http://dx.doi.org/10.1186/s13007-020-00570-z |
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author | Gao, Junfeng French, Andrew P. Pound, Michael P. He, Yong Pridmore, Tony P. Pieters, Jan G. |
author_facet | Gao, Junfeng French, Andrew P. Pound, Michael P. He, Yong Pridmore, Tony P. Pieters, Jan G. |
author_sort | Gao, Junfeng |
collection | PubMed |
description | BACKGROUND: Convolvulus sepium (hedge bindweed) detection in sugar beet fields remains a challenging problem due to variation in appearance of plants, illumination changes, foliage occlusions, and different growth stages under field conditions. Current approaches for weed and crop recognition, segmentation and detection rely predominantly on conventional machine-learning techniques that require a large set of hand-crafted features for modelling. These might fail to generalize over different fields and environments. RESULTS: Here, we present an approach that develops a deep convolutional neural network (CNN) based on the tiny YOLOv3 architecture for C. sepium and sugar beet detection. We generated 2271 synthetic images, before combining these images with 452 field images to train the developed model. YOLO anchor box sizes were calculated from the training dataset using a k-means clustering approach. The resulting model was tested on 100 field images, showing that the combination of synthetic and original field images to train the developed model could improve the mean average precision (mAP) metric from 0.751 to 0.829 compared to using collected field images alone. We also compared the performance of the developed model with the YOLOv3 and Tiny YOLO models. The developed model achieved a better trade-off between accuracy and speed. Specifically, the average precisions (APs@IoU0.5) of C. sepium and sugar beet were 0.761 and 0.897 respectively with 6.48 ms inference time per image (800 × 1200) on a NVIDIA Titan X GPU environment. CONCLUSION: The developed model has the potential to be deployed on an embedded mobile platform like the Jetson TX for online weed detection and management due to its high-speed inference. It is recommendable to use synthetic images and empirical field images together in training stage to improve the performance of models. |
format | Online Article Text |
id | pubmed-7059384 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-70593842020-03-12 Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields Gao, Junfeng French, Andrew P. Pound, Michael P. He, Yong Pridmore, Tony P. Pieters, Jan G. Plant Methods Research BACKGROUND: Convolvulus sepium (hedge bindweed) detection in sugar beet fields remains a challenging problem due to variation in appearance of plants, illumination changes, foliage occlusions, and different growth stages under field conditions. Current approaches for weed and crop recognition, segmentation and detection rely predominantly on conventional machine-learning techniques that require a large set of hand-crafted features for modelling. These might fail to generalize over different fields and environments. RESULTS: Here, we present an approach that develops a deep convolutional neural network (CNN) based on the tiny YOLOv3 architecture for C. sepium and sugar beet detection. We generated 2271 synthetic images, before combining these images with 452 field images to train the developed model. YOLO anchor box sizes were calculated from the training dataset using a k-means clustering approach. The resulting model was tested on 100 field images, showing that the combination of synthetic and original field images to train the developed model could improve the mean average precision (mAP) metric from 0.751 to 0.829 compared to using collected field images alone. We also compared the performance of the developed model with the YOLOv3 and Tiny YOLO models. The developed model achieved a better trade-off between accuracy and speed. Specifically, the average precisions (APs@IoU0.5) of C. sepium and sugar beet were 0.761 and 0.897 respectively with 6.48 ms inference time per image (800 × 1200) on a NVIDIA Titan X GPU environment. CONCLUSION: The developed model has the potential to be deployed on an embedded mobile platform like the Jetson TX for online weed detection and management due to its high-speed inference. It is recommendable to use synthetic images and empirical field images together in training stage to improve the performance of models. BioMed Central 2020-03-05 /pmc/articles/PMC7059384/ /pubmed/32165909 http://dx.doi.org/10.1186/s13007-020-00570-z Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Gao, Junfeng French, Andrew P. Pound, Michael P. He, Yong Pridmore, Tony P. Pieters, Jan G. Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields |
title | Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields |
title_full | Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields |
title_fullStr | Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields |
title_full_unstemmed | Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields |
title_short | Deep convolutional neural networks for image-based Convolvulus sepium detection in sugar beet fields |
title_sort | deep convolutional neural networks for image-based convolvulus sepium detection in sugar beet fields |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7059384/ https://www.ncbi.nlm.nih.gov/pubmed/32165909 http://dx.doi.org/10.1186/s13007-020-00570-z |
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