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Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR
In this study, we measured the human epidermal growth factor receptor 2 (HER2) copy number in both tissue and plasma samples of gastric cancer patients by using droplet digital polymerase chain reaction (ddPCR) method. Eighty gastric cancer patients were enrolled and both formalin-fixed and paraffin...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7060190/ https://www.ncbi.nlm.nih.gov/pubmed/32144300 http://dx.doi.org/10.1038/s41598-020-60897-4 |
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author | Kim, Boram Nam, Soo Kyung Seo, Soo Hyun Park, Kyoung Un Ahn, Sang-Hoon Park, Do Joong Kim, Hyung-Ho Kim, Woo Ho Lee, Hye Seung |
author_facet | Kim, Boram Nam, Soo Kyung Seo, Soo Hyun Park, Kyoung Un Ahn, Sang-Hoon Park, Do Joong Kim, Hyung-Ho Kim, Woo Ho Lee, Hye Seung |
author_sort | Kim, Boram |
collection | PubMed |
description | In this study, we measured the human epidermal growth factor receptor 2 (HER2) copy number in both tissue and plasma samples of gastric cancer patients by using droplet digital polymerase chain reaction (ddPCR) method. Eighty gastric cancer patients were enrolled and both formalin-fixed and paraffin-embedded tissue and preoperative plasma samples were collected. HER2 status was determined by HER2 immunohistochemistry (IHC)/silver in situ hybridization (SISH) in tissue samples and ddPCR of the target gene HER2 and the reference gene eukaryotic translation initiation factor 2C, 1 in both tissue and plasma. The concordance rate of tissue HER2 status determined by IHC/SISH and HER2 ddPCR was 90.0% (72/80), and the sensitivity and specificity of tissue ddPCR were 85.0% and 95.0%, respectively. The concordance rate of plasma ddPCR and IHC/SISH was 63.8% (51/80). The sensitivity, specificity, positive predictive value, and negative predictive value of plasma HER2 ddPCR were 37.5%, 90.0%, 79.0%, and 59.0%, respectively. As HER2 measurement by tissue ddPCR showed a high concordance rate with HER2 status by IHC/SISH, it could replace tissue IHC/SISH testing in gastric cancer. These findings may contribute to the development of tissue and plasma HER2 testing that would be useful in daily practice. |
format | Online Article Text |
id | pubmed-7060190 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-70601902020-03-18 Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR Kim, Boram Nam, Soo Kyung Seo, Soo Hyun Park, Kyoung Un Ahn, Sang-Hoon Park, Do Joong Kim, Hyung-Ho Kim, Woo Ho Lee, Hye Seung Sci Rep Article In this study, we measured the human epidermal growth factor receptor 2 (HER2) copy number in both tissue and plasma samples of gastric cancer patients by using droplet digital polymerase chain reaction (ddPCR) method. Eighty gastric cancer patients were enrolled and both formalin-fixed and paraffin-embedded tissue and preoperative plasma samples were collected. HER2 status was determined by HER2 immunohistochemistry (IHC)/silver in situ hybridization (SISH) in tissue samples and ddPCR of the target gene HER2 and the reference gene eukaryotic translation initiation factor 2C, 1 in both tissue and plasma. The concordance rate of tissue HER2 status determined by IHC/SISH and HER2 ddPCR was 90.0% (72/80), and the sensitivity and specificity of tissue ddPCR were 85.0% and 95.0%, respectively. The concordance rate of plasma ddPCR and IHC/SISH was 63.8% (51/80). The sensitivity, specificity, positive predictive value, and negative predictive value of plasma HER2 ddPCR were 37.5%, 90.0%, 79.0%, and 59.0%, respectively. As HER2 measurement by tissue ddPCR showed a high concordance rate with HER2 status by IHC/SISH, it could replace tissue IHC/SISH testing in gastric cancer. These findings may contribute to the development of tissue and plasma HER2 testing that would be useful in daily practice. Nature Publishing Group UK 2020-03-06 /pmc/articles/PMC7060190/ /pubmed/32144300 http://dx.doi.org/10.1038/s41598-020-60897-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kim, Boram Nam, Soo Kyung Seo, Soo Hyun Park, Kyoung Un Ahn, Sang-Hoon Park, Do Joong Kim, Hyung-Ho Kim, Woo Ho Lee, Hye Seung Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR |
title | Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR |
title_full | Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR |
title_fullStr | Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR |
title_full_unstemmed | Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR |
title_short | Comparative analysis of HER2 copy number between plasma and tissue samples in gastric cancer using droplet digital PCR |
title_sort | comparative analysis of her2 copy number between plasma and tissue samples in gastric cancer using droplet digital pcr |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7060190/ https://www.ncbi.nlm.nih.gov/pubmed/32144300 http://dx.doi.org/10.1038/s41598-020-60897-4 |
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