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A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales

Predictions of habitat suitability for invasive plant species can guide risk assessments at regional and national scales and inform early detection and rapid-response strategies at local scales. We present a general approach to invasive species modeling and mapping that meets objectives at multiple...

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Autores principales: Young, Nicholas E., Jarnevich, Catherine S., Sofaer, Helen R., Pearse, Ian, Sullivan, Julia, Engelstad, Peder, Stohlgren, Thomas J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7062246/
https://www.ncbi.nlm.nih.gov/pubmed/32150554
http://dx.doi.org/10.1371/journal.pone.0229253
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author Young, Nicholas E.
Jarnevich, Catherine S.
Sofaer, Helen R.
Pearse, Ian
Sullivan, Julia
Engelstad, Peder
Stohlgren, Thomas J.
author_facet Young, Nicholas E.
Jarnevich, Catherine S.
Sofaer, Helen R.
Pearse, Ian
Sullivan, Julia
Engelstad, Peder
Stohlgren, Thomas J.
author_sort Young, Nicholas E.
collection PubMed
description Predictions of habitat suitability for invasive plant species can guide risk assessments at regional and national scales and inform early detection and rapid-response strategies at local scales. We present a general approach to invasive species modeling and mapping that meets objectives at multiple scales. Our methodology is designed to balance trade-offs between developing highly customized models for few species versus fitting non-specific and generic models for numerous species. We developed a national library of environmental variables known to physiologically limit plant distributions and relied on human input based on natural history knowledge to further narrow the variable set for each species before developing habitat suitability models. To ensure efficiency, we used largely automated modeling approaches and human input only at key junctures. We explore and present uncertainty by using two alternative sources of background samples, including five statistical algorithms, and constructing model ensembles. We demonstrate the use and efficiency of the Software for Assisted Habitat Modeling [SAHM 2.1.2], a package in VisTrails, which performs the majority of the modeling analyses. Our workflow includes solicitation of expert feedback on model outputs such as spatial prediction results and variable response curves, and iterative improvement based on new data availability and directed field validation of initial model results. We highlight the utility of the models for decision-making at regional and local scales with case studies of two plant species that invade natural areas: fountain grass (Pennisetum setaceum) and goutweed (Aegopodium podagraria). By balancing model automation with human intervention, we can efficiently provide land managers with mapped predicted distributions for multiple invasive species to inform decisions across spatial scales.
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spelling pubmed-70622462020-03-23 A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales Young, Nicholas E. Jarnevich, Catherine S. Sofaer, Helen R. Pearse, Ian Sullivan, Julia Engelstad, Peder Stohlgren, Thomas J. PLoS One Research Article Predictions of habitat suitability for invasive plant species can guide risk assessments at regional and national scales and inform early detection and rapid-response strategies at local scales. We present a general approach to invasive species modeling and mapping that meets objectives at multiple scales. Our methodology is designed to balance trade-offs between developing highly customized models for few species versus fitting non-specific and generic models for numerous species. We developed a national library of environmental variables known to physiologically limit plant distributions and relied on human input based on natural history knowledge to further narrow the variable set for each species before developing habitat suitability models. To ensure efficiency, we used largely automated modeling approaches and human input only at key junctures. We explore and present uncertainty by using two alternative sources of background samples, including five statistical algorithms, and constructing model ensembles. We demonstrate the use and efficiency of the Software for Assisted Habitat Modeling [SAHM 2.1.2], a package in VisTrails, which performs the majority of the modeling analyses. Our workflow includes solicitation of expert feedback on model outputs such as spatial prediction results and variable response curves, and iterative improvement based on new data availability and directed field validation of initial model results. We highlight the utility of the models for decision-making at regional and local scales with case studies of two plant species that invade natural areas: fountain grass (Pennisetum setaceum) and goutweed (Aegopodium podagraria). By balancing model automation with human intervention, we can efficiently provide land managers with mapped predicted distributions for multiple invasive species to inform decisions across spatial scales. Public Library of Science 2020-03-09 /pmc/articles/PMC7062246/ /pubmed/32150554 http://dx.doi.org/10.1371/journal.pone.0229253 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Young, Nicholas E.
Jarnevich, Catherine S.
Sofaer, Helen R.
Pearse, Ian
Sullivan, Julia
Engelstad, Peder
Stohlgren, Thomas J.
A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
title A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
title_full A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
title_fullStr A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
title_full_unstemmed A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
title_short A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
title_sort modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7062246/
https://www.ncbi.nlm.nih.gov/pubmed/32150554
http://dx.doi.org/10.1371/journal.pone.0229253
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