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Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka

The wood adulteration is a common problem and under-studied aspect in the timber industry of Sri Lanka. Hence we conducted a survey to assess the status of timber adulteration and check the applicability of morphometric parameters and DNA barcoding to detect the adulterated timber sources. We interv...

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Autores principales: Kannangara, Sachithrani, Karunarathne, Sachinthani, Ranaweera, Lahiru, Ananda, Kalpani, Ranathunga, Disnie, Jayarathne, Hashan, Weebadde, Cholani, Sooriyapathirana, Suneth
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7062781/
https://www.ncbi.nlm.nih.gov/pubmed/32152386
http://dx.doi.org/10.1038/s41598-020-61415-2
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author Kannangara, Sachithrani
Karunarathne, Sachinthani
Ranaweera, Lahiru
Ananda, Kalpani
Ranathunga, Disnie
Jayarathne, Hashan
Weebadde, Cholani
Sooriyapathirana, Suneth
author_facet Kannangara, Sachithrani
Karunarathne, Sachinthani
Ranaweera, Lahiru
Ananda, Kalpani
Ranathunga, Disnie
Jayarathne, Hashan
Weebadde, Cholani
Sooriyapathirana, Suneth
author_sort Kannangara, Sachithrani
collection PubMed
description The wood adulteration is a common problem and under-studied aspect in the timber industry of Sri Lanka. Hence we conducted a survey to assess the status of timber adulteration and check the applicability of morphometric parameters and DNA barcoding to detect the adulterated timber sources. We interviewed the stakeholders of the timber industry to collect information regarding timber adulterations. We measured the morphometric parameters; wood density and sizes of the xylem elements of the standard and adulterant species. For DNA barcoding, DNA was extracted from the wood of the selected standard and adulterant species and subjected to PCR using the markers, matK-trnT and atpB-rbcL. The PCR products were subjected to DNA sequencing. According to the survey, 92.5% of patrons, 73.7% of manufacturers and 96.7% of carpenters said timber adulteration is taking place in the country. The respondents said that the standard timber species; Tectona grandis, Artocarpus heterophyllus, and Swietenia macrophylla, profoundly undergo adulteration in Sri Lanka. The morphometric parameters did not discriminate the adulterant species from the standard species. The DNA barcodes matK-trnT and atpB-rbcL provided unique polymorphic DNA sequences with specific lengths for each species permitting the precise establishment of species identity and enabling the accurate detection of timber adulterations.
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spelling pubmed-70627812020-03-18 Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka Kannangara, Sachithrani Karunarathne, Sachinthani Ranaweera, Lahiru Ananda, Kalpani Ranathunga, Disnie Jayarathne, Hashan Weebadde, Cholani Sooriyapathirana, Suneth Sci Rep Article The wood adulteration is a common problem and under-studied aspect in the timber industry of Sri Lanka. Hence we conducted a survey to assess the status of timber adulteration and check the applicability of morphometric parameters and DNA barcoding to detect the adulterated timber sources. We interviewed the stakeholders of the timber industry to collect information regarding timber adulterations. We measured the morphometric parameters; wood density and sizes of the xylem elements of the standard and adulterant species. For DNA barcoding, DNA was extracted from the wood of the selected standard and adulterant species and subjected to PCR using the markers, matK-trnT and atpB-rbcL. The PCR products were subjected to DNA sequencing. According to the survey, 92.5% of patrons, 73.7% of manufacturers and 96.7% of carpenters said timber adulteration is taking place in the country. The respondents said that the standard timber species; Tectona grandis, Artocarpus heterophyllus, and Swietenia macrophylla, profoundly undergo adulteration in Sri Lanka. The morphometric parameters did not discriminate the adulterant species from the standard species. The DNA barcodes matK-trnT and atpB-rbcL provided unique polymorphic DNA sequences with specific lengths for each species permitting the precise establishment of species identity and enabling the accurate detection of timber adulterations. Nature Publishing Group UK 2020-03-09 /pmc/articles/PMC7062781/ /pubmed/32152386 http://dx.doi.org/10.1038/s41598-020-61415-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kannangara, Sachithrani
Karunarathne, Sachinthani
Ranaweera, Lahiru
Ananda, Kalpani
Ranathunga, Disnie
Jayarathne, Hashan
Weebadde, Cholani
Sooriyapathirana, Suneth
Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka
title Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka
title_full Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka
title_fullStr Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka
title_full_unstemmed Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka
title_short Assessment of the applicability of wood anatomy and DNA barcoding to detect the timber adulterations in Sri Lanka
title_sort assessment of the applicability of wood anatomy and dna barcoding to detect the timber adulterations in sri lanka
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7062781/
https://www.ncbi.nlm.nih.gov/pubmed/32152386
http://dx.doi.org/10.1038/s41598-020-61415-2
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