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Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae

microRNAs (miRNAs) are an abundant class of non-coding RNA species with important regulatory roles in gene expression at the posttranscriptional level. The helminth Acanthocheilonema viteae serves as model organism for research on parasitic filarial nematodes. Total RNA secreted or excreted in vitro...

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Detalles Bibliográficos
Autores principales: Soichot, Julien, Endriss, Yvette, Marti, Hanspeter, Tritten, Lucienne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7063170/
https://www.ncbi.nlm.nih.gov/pubmed/32181299
http://dx.doi.org/10.1016/j.dib.2020.105334
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author Soichot, Julien
Endriss, Yvette
Marti, Hanspeter
Tritten, Lucienne
author_facet Soichot, Julien
Endriss, Yvette
Marti, Hanspeter
Tritten, Lucienne
author_sort Soichot, Julien
collection PubMed
description microRNAs (miRNAs) are an abundant class of non-coding RNA species with important regulatory roles in gene expression at the posttranscriptional level. The helminth Acanthocheilonema viteae serves as model organism for research on parasitic filarial nematodes. Total RNA secreted or excreted in vitro by 1500 adult female and male A. viteae over 3 weeks was isolated from culture media previously processed by differential ultracentrifugation. miRNA sequencing revealed the presence of 360 unique miRNA candidates released by adult A. viteae in vitro. Among them, 74 high-confidence unique miRNAs, as well as several potential novel miRNA candidates were discovered. A large proportion of the sequenced miRNA candidates appeared differentially expressed between the male and female samples based on normalized copy count. The presence of extracellular vesicles, often rich in miRNAs, could not be confirmed unambiguously by transmission electron microscopy.
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spelling pubmed-70631702020-03-16 Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae Soichot, Julien Endriss, Yvette Marti, Hanspeter Tritten, Lucienne Data Brief Immunology and Microbiology microRNAs (miRNAs) are an abundant class of non-coding RNA species with important regulatory roles in gene expression at the posttranscriptional level. The helminth Acanthocheilonema viteae serves as model organism for research on parasitic filarial nematodes. Total RNA secreted or excreted in vitro by 1500 adult female and male A. viteae over 3 weeks was isolated from culture media previously processed by differential ultracentrifugation. miRNA sequencing revealed the presence of 360 unique miRNA candidates released by adult A. viteae in vitro. Among them, 74 high-confidence unique miRNAs, as well as several potential novel miRNA candidates were discovered. A large proportion of the sequenced miRNA candidates appeared differentially expressed between the male and female samples based on normalized copy count. The presence of extracellular vesicles, often rich in miRNAs, could not be confirmed unambiguously by transmission electron microscopy. Elsevier 2020-02-25 /pmc/articles/PMC7063170/ /pubmed/32181299 http://dx.doi.org/10.1016/j.dib.2020.105334 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Immunology and Microbiology
Soichot, Julien
Endriss, Yvette
Marti, Hanspeter
Tritten, Lucienne
Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae
title Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae
title_full Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae
title_fullStr Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae
title_full_unstemmed Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae
title_short Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae
title_sort secreted microrna data from the parasitic filarial nematode acanthocheilonema viteae
topic Immunology and Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7063170/
https://www.ncbi.nlm.nih.gov/pubmed/32181299
http://dx.doi.org/10.1016/j.dib.2020.105334
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