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Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
ABSTRACT: The heterotrimeric electron-bifurcating [FeFe] hydrogenase (HydABC) from Thermotoga maritima (Tm) couples the endergonic reduction of protons (H(+)) by dihydronicotinamide adenine dinucleotide (NADH) (∆G(0) ≈ 18 kJ mol(−1)) to the exergonic reduction of H(+) by reduced ferredoxin (Fd(red))...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7064455/ https://www.ncbi.nlm.nih.gov/pubmed/31823008 http://dx.doi.org/10.1007/s00775-019-01747-1 |
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author | Chongdar, Nipa Pawlak, Krzysztof Rüdiger, Olaf Reijerse, Edward J. Rodríguez-Maciá, Patricia Lubitz, Wolfgang Birrell, James A. Ogata, Hideaki |
author_facet | Chongdar, Nipa Pawlak, Krzysztof Rüdiger, Olaf Reijerse, Edward J. Rodríguez-Maciá, Patricia Lubitz, Wolfgang Birrell, James A. Ogata, Hideaki |
author_sort | Chongdar, Nipa |
collection | PubMed |
description | ABSTRACT: The heterotrimeric electron-bifurcating [FeFe] hydrogenase (HydABC) from Thermotoga maritima (Tm) couples the endergonic reduction of protons (H(+)) by dihydronicotinamide adenine dinucleotide (NADH) (∆G(0) ≈ 18 kJ mol(−1)) to the exergonic reduction of H(+) by reduced ferredoxin (Fd(red)) (∆G(0) ≈ − 16 kJ mol(−1)). The specific mechanism by which HydABC functions is not understood. In the current study, we describe the biochemical and spectroscopic characterization of TmHydABC recombinantly produced in Escherichia coli and artificially maturated with a synthetic diiron cofactor. We found that TmHydABC catalyzed the hydrogen (H(2))-dependent reduction of nicotinamide adenine dinucleotide (NAD(+)) in the presence of oxidized ferredoxin (Fd(ox)) at a rate of ≈17 μmol NADH min(−1) mg(−1). Our data suggest that only one flavin is present in the enzyme and is not likely to be the site of electron bifurcation. FTIR and EPR spectroscopy, as well as FTIR spectroelectrochemistry, demonstrated that the active site for H(2) conversion, the H-cluster, in TmHydABC behaves essentially the same as in prototypical [FeFe] hydrogenases, and is most likely also not the site of electron bifurcation. The implications of these results are discussed with respect to the current hypotheses on the electron bifurcation mechanism of [FeFe] hydrogenases. Overall, the results provide insight into the electron-bifurcating mechanism and present a well-defined system for further investigations of this fascinating class of [FeFe] hydrogenases. GRAPHIC ABSTRACT: [Image: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00775-019-01747-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7064455 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-70644552020-03-23 Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase Chongdar, Nipa Pawlak, Krzysztof Rüdiger, Olaf Reijerse, Edward J. Rodríguez-Maciá, Patricia Lubitz, Wolfgang Birrell, James A. Ogata, Hideaki J Biol Inorg Chem Original Paper ABSTRACT: The heterotrimeric electron-bifurcating [FeFe] hydrogenase (HydABC) from Thermotoga maritima (Tm) couples the endergonic reduction of protons (H(+)) by dihydronicotinamide adenine dinucleotide (NADH) (∆G(0) ≈ 18 kJ mol(−1)) to the exergonic reduction of H(+) by reduced ferredoxin (Fd(red)) (∆G(0) ≈ − 16 kJ mol(−1)). The specific mechanism by which HydABC functions is not understood. In the current study, we describe the biochemical and spectroscopic characterization of TmHydABC recombinantly produced in Escherichia coli and artificially maturated with a synthetic diiron cofactor. We found that TmHydABC catalyzed the hydrogen (H(2))-dependent reduction of nicotinamide adenine dinucleotide (NAD(+)) in the presence of oxidized ferredoxin (Fd(ox)) at a rate of ≈17 μmol NADH min(−1) mg(−1). Our data suggest that only one flavin is present in the enzyme and is not likely to be the site of electron bifurcation. FTIR and EPR spectroscopy, as well as FTIR spectroelectrochemistry, demonstrated that the active site for H(2) conversion, the H-cluster, in TmHydABC behaves essentially the same as in prototypical [FeFe] hydrogenases, and is most likely also not the site of electron bifurcation. The implications of these results are discussed with respect to the current hypotheses on the electron bifurcation mechanism of [FeFe] hydrogenases. Overall, the results provide insight into the electron-bifurcating mechanism and present a well-defined system for further investigations of this fascinating class of [FeFe] hydrogenases. GRAPHIC ABSTRACT: [Image: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00775-019-01747-1) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2019-12-10 2020 /pmc/articles/PMC7064455/ /pubmed/31823008 http://dx.doi.org/10.1007/s00775-019-01747-1 Text en © The Author(s) 2019 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Original Paper Chongdar, Nipa Pawlak, Krzysztof Rüdiger, Olaf Reijerse, Edward J. Rodríguez-Maciá, Patricia Lubitz, Wolfgang Birrell, James A. Ogata, Hideaki Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase |
title | Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase |
title_full | Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase |
title_fullStr | Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase |
title_full_unstemmed | Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase |
title_short | Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase |
title_sort | spectroscopic and biochemical insight into an electron-bifurcating [fefe] hydrogenase |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7064455/ https://www.ncbi.nlm.nih.gov/pubmed/31823008 http://dx.doi.org/10.1007/s00775-019-01747-1 |
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