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Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase

ABSTRACT: The heterotrimeric electron-bifurcating [FeFe] hydrogenase (HydABC) from Thermotoga maritima (Tm) couples the endergonic reduction of protons (H(+)) by dihydronicotinamide adenine dinucleotide (NADH) (∆G(0) ≈ 18 kJ mol(−1)) to the exergonic reduction of H(+) by reduced ferredoxin (Fd(red))...

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Autores principales: Chongdar, Nipa, Pawlak, Krzysztof, Rüdiger, Olaf, Reijerse, Edward J., Rodríguez-Maciá, Patricia, Lubitz, Wolfgang, Birrell, James A., Ogata, Hideaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7064455/
https://www.ncbi.nlm.nih.gov/pubmed/31823008
http://dx.doi.org/10.1007/s00775-019-01747-1
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author Chongdar, Nipa
Pawlak, Krzysztof
Rüdiger, Olaf
Reijerse, Edward J.
Rodríguez-Maciá, Patricia
Lubitz, Wolfgang
Birrell, James A.
Ogata, Hideaki
author_facet Chongdar, Nipa
Pawlak, Krzysztof
Rüdiger, Olaf
Reijerse, Edward J.
Rodríguez-Maciá, Patricia
Lubitz, Wolfgang
Birrell, James A.
Ogata, Hideaki
author_sort Chongdar, Nipa
collection PubMed
description ABSTRACT: The heterotrimeric electron-bifurcating [FeFe] hydrogenase (HydABC) from Thermotoga maritima (Tm) couples the endergonic reduction of protons (H(+)) by dihydronicotinamide adenine dinucleotide (NADH) (∆G(0) ≈ 18 kJ mol(−1)) to the exergonic reduction of H(+) by reduced ferredoxin (Fd(red)) (∆G(0) ≈ − 16 kJ mol(−1)). The specific mechanism by which HydABC functions is not understood. In the current study, we describe the biochemical and spectroscopic characterization of TmHydABC recombinantly produced in Escherichia coli and artificially maturated with a synthetic diiron cofactor. We found that TmHydABC catalyzed the hydrogen (H(2))-dependent reduction of nicotinamide adenine dinucleotide (NAD(+)) in the presence of oxidized ferredoxin (Fd(ox)) at a rate of  ≈17 μmol NADH min(−1) mg(−1). Our data suggest that only one flavin is present in the enzyme and is not likely to be the site of electron bifurcation. FTIR and EPR spectroscopy, as well as FTIR spectroelectrochemistry, demonstrated that the active site for H(2) conversion, the H-cluster, in TmHydABC behaves essentially the same as in prototypical [FeFe] hydrogenases, and is most likely also not the site of electron bifurcation. The implications of these results are discussed with respect to the current hypotheses on the electron bifurcation mechanism of [FeFe] hydrogenases. Overall, the results provide insight into the electron-bifurcating mechanism and present a well-defined system for further investigations of this fascinating class of [FeFe] hydrogenases. GRAPHIC ABSTRACT: [Image: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00775-019-01747-1) contains supplementary material, which is available to authorized users.
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spelling pubmed-70644552020-03-23 Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase Chongdar, Nipa Pawlak, Krzysztof Rüdiger, Olaf Reijerse, Edward J. Rodríguez-Maciá, Patricia Lubitz, Wolfgang Birrell, James A. Ogata, Hideaki J Biol Inorg Chem Original Paper ABSTRACT: The heterotrimeric electron-bifurcating [FeFe] hydrogenase (HydABC) from Thermotoga maritima (Tm) couples the endergonic reduction of protons (H(+)) by dihydronicotinamide adenine dinucleotide (NADH) (∆G(0) ≈ 18 kJ mol(−1)) to the exergonic reduction of H(+) by reduced ferredoxin (Fd(red)) (∆G(0) ≈ − 16 kJ mol(−1)). The specific mechanism by which HydABC functions is not understood. In the current study, we describe the biochemical and spectroscopic characterization of TmHydABC recombinantly produced in Escherichia coli and artificially maturated with a synthetic diiron cofactor. We found that TmHydABC catalyzed the hydrogen (H(2))-dependent reduction of nicotinamide adenine dinucleotide (NAD(+)) in the presence of oxidized ferredoxin (Fd(ox)) at a rate of  ≈17 μmol NADH min(−1) mg(−1). Our data suggest that only one flavin is present in the enzyme and is not likely to be the site of electron bifurcation. FTIR and EPR spectroscopy, as well as FTIR spectroelectrochemistry, demonstrated that the active site for H(2) conversion, the H-cluster, in TmHydABC behaves essentially the same as in prototypical [FeFe] hydrogenases, and is most likely also not the site of electron bifurcation. The implications of these results are discussed with respect to the current hypotheses on the electron bifurcation mechanism of [FeFe] hydrogenases. Overall, the results provide insight into the electron-bifurcating mechanism and present a well-defined system for further investigations of this fascinating class of [FeFe] hydrogenases. GRAPHIC ABSTRACT: [Image: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00775-019-01747-1) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2019-12-10 2020 /pmc/articles/PMC7064455/ /pubmed/31823008 http://dx.doi.org/10.1007/s00775-019-01747-1 Text en © The Author(s) 2019 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Original Paper
Chongdar, Nipa
Pawlak, Krzysztof
Rüdiger, Olaf
Reijerse, Edward J.
Rodríguez-Maciá, Patricia
Lubitz, Wolfgang
Birrell, James A.
Ogata, Hideaki
Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
title Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
title_full Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
title_fullStr Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
title_full_unstemmed Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
title_short Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase
title_sort spectroscopic and biochemical insight into an electron-bifurcating [fefe] hydrogenase
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7064455/
https://www.ncbi.nlm.nih.gov/pubmed/31823008
http://dx.doi.org/10.1007/s00775-019-01747-1
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