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Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study

BACKGROUND: Fever is the most common chief complaint of emergency patients. Early identification of patients at an increasing risk of death may avert adverse outcomes. The aim of this study was to establish an early prediction model of fatal adverse prognosis of fever patients by extracting key indi...

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Autores principales: Zhao, Chun-Hong, Wu, Hui-Tao, Che, He-Bin, Song, Ya-Nan, Zhao, Yu-Zhuo, Li, Kai-Yuan, Xiao, Hong-Ju, Zhai, Yong-Zhi, Liu, Xin, Lu, Hong-Xi, Li, Tan-Shi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7065855/
https://www.ncbi.nlm.nih.gov/pubmed/32044816
http://dx.doi.org/10.1097/CM9.0000000000000675
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author Zhao, Chun-Hong
Wu, Hui-Tao
Che, He-Bin
Song, Ya-Nan
Zhao, Yu-Zhuo
Li, Kai-Yuan
Xiao, Hong-Ju
Zhai, Yong-Zhi
Liu, Xin
Lu, Hong-Xi
Li, Tan-Shi
author_facet Zhao, Chun-Hong
Wu, Hui-Tao
Che, He-Bin
Song, Ya-Nan
Zhao, Yu-Zhuo
Li, Kai-Yuan
Xiao, Hong-Ju
Zhai, Yong-Zhi
Liu, Xin
Lu, Hong-Xi
Li, Tan-Shi
author_sort Zhao, Chun-Hong
collection PubMed
description BACKGROUND: Fever is the most common chief complaint of emergency patients. Early identification of patients at an increasing risk of death may avert adverse outcomes. The aim of this study was to establish an early prediction model of fatal adverse prognosis of fever patients by extracting key indicators using big data technology. METHODS: A retrospective study of patients’ data was conducted using the Emergency Rescue Database of Chinese People's Liberation Army General Hospital. Patients were divided into the fatal adverse prognosis group and the good prognosis group. The commonly used clinical indicators were compared. Recursive feature elimination (RFE) method was used to determine the optimal number of the included variables. In the training model, logistic regression, random forest, adaboost and bagging were selected. We also collected the emergency room data from December 2018 to December 2019 with the same inclusion and exclusion criterion. The performance of the model was evaluated by accuracy, F1-score, precision, sensitivity and the areas under receiver operator characteristic curves (ROC-AUC). RESULTS: The accuracy of logistic regression, decision tree, adaboost and bagging was 0.951, 0.928, 0.924, and 0.924, F1-scores were 0.938, 0.933, 0.930, and 0.930, the precision was 0.943, 0.938, 0.937, and 0.937, ROC-AUC were 0.808, 0.738, 0.736, and 0.885, respectively. ROC-AUC of ten-fold cross-validation in logistic and bagging models were 0.80 and 0.87, respectively. The top six coefficients and odds ratio (OR) values of the variables in the Logistic regression were cardiac troponin T (CTnT) (coefficient=0.346, OR = 1.413), temperature (T) (coefficient=0.235, OR = 1.265), respiratory rate (RR) (coefficient= –0.206,OR = 0.814), serum kalium (K) (coefficient=0.137, OR = 1.146), pulse oxygen saturation (SPO(2)) (coefficient= –0.101, OR = 0.904), and albumin (ALB) (coefficient= –0.043, OR = 0.958). The weights of the top six variables in the bagging model were: CTnT, RR, lactate dehydrogenase, serum amylase, heartrate, and systolic blood pressure. CONCLUSIONS: The main clinical indicators of concern included CTnT, RR, SPO(2), T, ALB and K. The bagging model and logistic regression model had better diagnostic performance comprehesively. Those may be conducive to the early identification of critical patients with fever by physicians.
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spelling pubmed-70658552020-03-24 Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study Zhao, Chun-Hong Wu, Hui-Tao Che, He-Bin Song, Ya-Nan Zhao, Yu-Zhuo Li, Kai-Yuan Xiao, Hong-Ju Zhai, Yong-Zhi Liu, Xin Lu, Hong-Xi Li, Tan-Shi Chin Med J (Engl) Original Articles BACKGROUND: Fever is the most common chief complaint of emergency patients. Early identification of patients at an increasing risk of death may avert adverse outcomes. The aim of this study was to establish an early prediction model of fatal adverse prognosis of fever patients by extracting key indicators using big data technology. METHODS: A retrospective study of patients’ data was conducted using the Emergency Rescue Database of Chinese People's Liberation Army General Hospital. Patients were divided into the fatal adverse prognosis group and the good prognosis group. The commonly used clinical indicators were compared. Recursive feature elimination (RFE) method was used to determine the optimal number of the included variables. In the training model, logistic regression, random forest, adaboost and bagging were selected. We also collected the emergency room data from December 2018 to December 2019 with the same inclusion and exclusion criterion. The performance of the model was evaluated by accuracy, F1-score, precision, sensitivity and the areas under receiver operator characteristic curves (ROC-AUC). RESULTS: The accuracy of logistic regression, decision tree, adaboost and bagging was 0.951, 0.928, 0.924, and 0.924, F1-scores were 0.938, 0.933, 0.930, and 0.930, the precision was 0.943, 0.938, 0.937, and 0.937, ROC-AUC were 0.808, 0.738, 0.736, and 0.885, respectively. ROC-AUC of ten-fold cross-validation in logistic and bagging models were 0.80 and 0.87, respectively. The top six coefficients and odds ratio (OR) values of the variables in the Logistic regression were cardiac troponin T (CTnT) (coefficient=0.346, OR = 1.413), temperature (T) (coefficient=0.235, OR = 1.265), respiratory rate (RR) (coefficient= –0.206,OR = 0.814), serum kalium (K) (coefficient=0.137, OR = 1.146), pulse oxygen saturation (SPO(2)) (coefficient= –0.101, OR = 0.904), and albumin (ALB) (coefficient= –0.043, OR = 0.958). The weights of the top six variables in the bagging model were: CTnT, RR, lactate dehydrogenase, serum amylase, heartrate, and systolic blood pressure. CONCLUSIONS: The main clinical indicators of concern included CTnT, RR, SPO(2), T, ALB and K. The bagging model and logistic regression model had better diagnostic performance comprehesively. Those may be conducive to the early identification of critical patients with fever by physicians. Wolters Kluwer Health 2020-03-05 2020-03-05 /pmc/articles/PMC7065855/ /pubmed/32044816 http://dx.doi.org/10.1097/CM9.0000000000000675 Text en Copyright © 2020 The Chinese Medical Association, produced by Wolters Kluwer, Inc. under the CC-BY-NC-ND license. http://creativecommons.org/licenses/by-nc-nd/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND), where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc-nd/4.0
spellingShingle Original Articles
Zhao, Chun-Hong
Wu, Hui-Tao
Che, He-Bin
Song, Ya-Nan
Zhao, Yu-Zhuo
Li, Kai-Yuan
Xiao, Hong-Ju
Zhai, Yong-Zhi
Liu, Xin
Lu, Hong-Xi
Li, Tan-Shi
Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study
title Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study
title_full Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study
title_fullStr Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study
title_full_unstemmed Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study
title_short Prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: A retrospective study
title_sort prediction of fatal adverse prognosis in patients with fever-related diseases based on machine learning: a retrospective study
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7065855/
https://www.ncbi.nlm.nih.gov/pubmed/32044816
http://dx.doi.org/10.1097/CM9.0000000000000675
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